RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 CCDC162PA2VCL2 907 aa18.4■□□□□ 0.54
USP25-204ENST00000400183 IDH3BO43837 385 aa18.4■□□□□ 0.54
USP25-204ENST00000400183 ACLYP53396 1101 aa18.4■□□□□ 0.54
USP25-204ENST00000400183 DSC2Q02487 901 aa18.4■□□□□ 0.54
USP25-204ENST00000400183 GNA12Q03113 381 aa18.4■□□□□ 0.54
USP25-204ENST00000400183 PTGES3Q15185 160 aaKnown RBP18.4■□□□□ 0.54
USP25-204ENST00000400183 ARHGEF4Q9NR80 690 aa18.4■□□□□ 0.54
USP25-204ENST00000400183 A0A1B0GVM2 712 aa18.39■□□□□ 0.54
USP25-204ENST00000400183 TCAF2A6NFQ2 919 aa18.39■□□□□ 0.54
USP25-204ENST00000400183 STBD1O95210 358 aa18.39■□□□□ 0.54
USP25-204ENST00000400183 C22orf31O95567 290 aa18.39■□□□□ 0.54
USP25-204ENST00000400183 ZNF132P52740 706 aa18.39■□□□□ 0.54
USP25-204ENST00000400183 NAE1Q13564 534 aa18.39■□□□□ 0.54
USP25-204ENST00000400183 HNRNPABQ99729 332 aaKnown RBP18.39■□□□□ 0.54
USP25-204ENST00000400183 SDCBP2Q9H190 292 aa18.39■□□□□ 0.54
USP25-204ENST00000400183 FAM83DQ9H4H8 585 aa18.39■□□□□ 0.54
USP25-204ENST00000400183 ZNF214Q9UL59 606 aaPredicted RBP18.39■□□□□ 0.54
USP25-204ENST00000400183 SLC1A5Q15758 541 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 RFWD3Q6PCD5 774 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 ADGRD1Q6QNK2 874 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 OR10H5Q8NGA6 315 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 OR2T34Q8NGX1 318 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 OR2T3Q8NH03 318 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 XAGE5Q8WWM1 108 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 CHID1Q9BWS9 393 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 MAGEH1Q9H213 219 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 MSX2P35548 267 aaPredicted RBP18.39■□□□□ 0.53
USP25-204ENST00000400183 CDH4P55283 916 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 PLA2G4EQ3MJ16 856 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 OLFML1Q6UWY5 402 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 ZYG11AQ6WRX3 759 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 CHST9Q7L1S5 443 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 VANGL1Q8TAA9 524 aaPredicted RBP18.39■□□□□ 0.53
USP25-204ENST00000400183 SMG7Q92540 1137 aaKnown RBP18.39■□□□□ 0.53
USP25-204ENST00000400183 PRKAR1AP10644 381 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 ZNF846Q147U1 533 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 ZNF697Q5TEC3 545 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 EQTNQ9NQ60 294 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 TIMM22Q9Y584 194 aa18.39■□□□□ 0.53
USP25-204ENST00000400183 STX16-NPEPL1H3BU86 382 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 STX16O14662 325 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 NOL4O94818 638 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 NADKO95544 446 aaPredicted RBP18.38■□□□□ 0.53
USP25-204ENST00000400183 PBX3P40426 434 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 RPIAP49247 311 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 PTPN5P54829 565 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 FAM92BQ6ZTR7 304 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 PIK3C3Q8NEB9 887 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 FEM1CQ96JP0 617 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 S100A14Q9HCY8 104 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 STXBP5LQ9Y2K9 1186 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 GPC6Q9Y625 555 aaPredicted RBP18.38■□□□□ 0.53
USP25-204ENST00000400183 LCA5LO95447 670 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 PRAMEF1O95521 474 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 VIPP01282 170 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 LCP2Q13094 533 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 GPN3Q9UHW5 284 aaPredicted RBP18.38■□□□□ 0.53
USP25-204ENST00000400183 GPR25O00155 361 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 MATN3O15232 486 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 ICAM3P32942 547 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 SRSF11Q05519 484 aaKnown RBP18.38■□□□□ 0.53
USP25-204ENST00000400183 ACAP2Q15057 778 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 IL23RQ5VWK5 629 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 BEND5Q7L4P6 421 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 SPPL2CQ8IUH8 684 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 GULP1Q9UBP9 304 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 MAFBQ9Y5Q3 323 aaPredicted RBP18.38■□□□□ 0.53
USP25-204ENST00000400183 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.38■□□□□ 0.53
USP25-204ENST00000400183 SYN3O14994 580 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 C2orf80Q0P641 193 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 ZBTB6Q15916 424 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 ARL13AQ5H913 290 aaPredicted RBP18.38■□□□□ 0.53
USP25-204ENST00000400183 TMEM63BQ5T3F8 832 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 CNTD1Q8N815 330 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 TMEM27Q9HBJ8 222 aa18.38■□□□□ 0.53
USP25-204ENST00000400183 RBM7Q9Y580 266 aaKnown RBP18.38■□□□□ 0.53
USP25-204ENST00000400183 ELOVL7A1L3X0 281 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 DPPA5A6NC42 116 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 DNM1LO00429 736 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 DUSP11O75319 330 aaKnown RBP18.37■□□□□ 0.53
USP25-204ENST00000400183 TM7SF2O76062 418 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 LAMP2P13473 410 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 ELNP15502 786 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 IGFALSP35858 605 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 MTHFRP42898 656 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 AP1S1P61966 158 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 PSRC1Q6PGN9 363 aaPredicted RBP18.37■□□□□ 0.53
USP25-204ENST00000400183 ZNF730Q6ZMV8 503 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 HPS6Q86YV9 775 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 MFSD3Q96ES6 412 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 BRINP2Q9C0B6 783 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 TCRBV7S2A1N4TA0A589 114 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 FPGTO14772 594 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 CASKO14936 926 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 NELFEP18615 380 aaKnown RBP18.37■□□□□ 0.53
USP25-204ENST00000400183 GPD2P43304 727 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 CLCNKBP51801 687 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 CLCQ05315 142 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 PPM1JQ5JR12 505 aa18.37■□□□□ 0.53
USP25-204ENST00000400183 GCNT6Q5T4J0 391 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms