RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 RMI1Q9H9A7 625 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 EXD2Q9NVH0 621 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 ITGB1BP2Q9UKP3 347 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 KCNH4Q9UQ05 1017 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 PCDHB3Q9Y5E6 796 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 PTGES3LE9PB15 166 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 CDH1P12830 882 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 EEFSECP57772 596 aaKnown RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 PLIN5Q00G26 463 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 CBX2Q14781 532 aaPredicted RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 CTU2Q2VPK5 515 aaKnown RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 DSG4Q86SJ6 1040 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 SLC7A5P1Q8MH63 180 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 ZNF408Q9H9D4 720 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 PDE10AQ9Y233 779 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 COL1A2P08123 1366 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 CXCL11O14625 94 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 EEDO75530 441 aaKnown RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 MTHFD2P13995 350 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 PIGAP37287 484 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 MTHFRP42898 656 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 GJA8P48165 433 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 MTPNP58546 118 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 LSM3P62310 102 aaKnown RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 ZNF33AQ06730 810 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 PPP1R8Q12972 351 aaKnown RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 SELPLGQ14242 412 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 IQSEC1Q6DN90 963 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 TMEM199Q8N511 208 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 CHDHQ8NE62 594 aaPredicted RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 NMRK2Q9NPI5 230 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 ENPP5Q9UJA9 477 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 LEF1Q9UJU2 399 aaPredicted RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 C16orf96A6NNT2 1141 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 SUPT3HB4E1H0 165 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 DEAF1O75398 565 aaPredicted RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 SLC22A3O75751 556 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 SLC25A27O95847 323 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 HTR1EP28566 365 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 PRDX3P30048 256 aaKnown RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 CD86P42081 329 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 POLR2JP52435 117 aaKnown RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 PTPRCAPQ14761 206 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 PLA2G4EQ3MJ16 856 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 SPATS1Q496A3 300 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 C6orf141Q5SZD1 244 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 ZNF549Q6P9A3 640 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 KDELC1Q6UW63 502 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 ARRDC4Q8NCT1 418 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 GABPB2Q8TAK5 448 aaPredicted RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 NUDT8Q8WV74 236 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 HDAC2Q92769 488 aaKnown RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 PPM1MQ96MI6 270 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 AKIP1Q9NQ31 210 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 POLE4Q9NR33 117 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 AIG1Q9NVV5 245 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 FAM118AQ9NWS6 357 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 MPP6Q9NZW5 540 aa13.88□□□□□ -0.19
APOB-202ENST00000399256 DNMT3BQ9UBC3 853 aaKnown RBP13.88□□□□□ -0.19
APOB-202ENST00000399256 RBM47A0AV96 593 aaKnown RBP13.87□□□□□ -0.19
APOB-202ENST00000399256 NFKBIAP25963 317 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 IL12AP29459 219 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 ADCYAP1R1P41586 468 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 CLCQ05315 142 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 LAPTM5Q13571 262 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 MAPK11Q15759 364 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 FRA10AC1Q70Z53 315 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 PROSER1Q86XN7 944 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 DTWD1Q8N5C7 304 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 FAM86B1Q8N7N1 296 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 ITFG1Q8TB96 612 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 MUL1Q969V5 352 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 ASB2Q96Q27 587 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 WDR12Q9GZL7 423 aaKnown RBP13.87□□□□□ -0.19
APOB-202ENST00000399256 ATP13A3Q9H7F0 1226 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 NT5MQ9NPB1 228 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 RBPJLQ9UBG7 517 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 VPS51Q9UID3 782 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 SNX5Q9Y5X3 404 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 DYTNA2CJ06 578 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 NCF1BA6NI72 391 aaPredicted RBP13.87□□□□□ -0.19
APOB-202ENST00000399256 NCF1CA8MVU1 366 aaPredicted RBP13.87□□□□□ -0.19
APOB-202ENST00000399256 NCF1P14598 390 aaPredicted RBP13.87□□□□□ -0.19
APOB-202ENST00000399256 GJA5P36382 358 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 ZNF135P52742 658 aaPredicted RBP13.87□□□□□ -0.19
APOB-202ENST00000399256 GP2P55259 537 aaKnown RBP13.87□□□□□ -0.19
APOB-202ENST00000399256 BCL2A1Q16548 175 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 CTF1Q16619 201 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 INAVAQ3KP66 663 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 RBM23Q86U06 439 aaKnown RBP13.87□□□□□ -0.19
APOB-202ENST00000399256 PPTC7Q8NI37 304 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 ZNF641Q96N77 438 aaPredicted RBP13.87□□□□□ -0.19
APOB-202ENST00000399256 MBOAT4Q96T53 435 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 ACOX2Q99424 681 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 AMBRA1Q9C0C7 1298 aa13.87□□□□□ -0.19
APOB-202ENST00000399256 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.86□□□□□ -0.19
APOB-202ENST00000399256 G3V2T6 193 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 TBC1D4O60343 1298 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 GPR32O75388 356 aa13.86□□□□□ -0.19
APOB-202ENST00000399256 CAPN15O75808 1086 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms