RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 RNH1P13489 461 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 INSRRP14616 1297 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 CPA1P15085 419 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 GSTM3P21266 225 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 CFL1P23528 166 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 PTPN7P35236 360 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 ZNF143P52747 638 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 PTPN5P54829 565 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 PDK3Q15120 406 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 GALNTL6Q49A17 601 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 CHST9Q7L1S5 443 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 DAW1Q8N136 415 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 WDSUB1Q8N9V3 476 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 OR5L2Q8NGL0 311 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 EEF1AKMT1Q8WVE0 214 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 ANKS1AQ92625 1134 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 SPATA13Q96N96 652 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 ACTL8Q9H568 366 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 NOD2Q9HC29 1040 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 LRRC4CQ9HCJ2 640 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 DDX43Q9NXZ2 648 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 PRELID1Q9Y255 219 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 RGSL1A5PLK6 1076 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 SCDO00767 359 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 TOR1BO14657 336 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 LRIG2O94898 1065 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 OR6B1O95007 311 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 INMTO95050 263 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 PRPS2P11908 318 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 KCNA5P22460 613 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 MATKP42679 507 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 NFE2L1Q14494 772 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 CCDC85BQ15834 202 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 UBE2SQ16763 222 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 BEND6Q5SZJ8 279 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 FAXCQ5TGI0 409 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 REP15Q6BDI9 236 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 GPAT2Q6NUI2 795 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 PACS2Q86VP3 889 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 ZNF548Q8NEK5 533 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 MAGEE2Q8TD90 523 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 UPF1Q92900 1129 aaKnown RBP eCLIP2.71□□□□□ -1.98
CHD9-202ENST00000398510 CENPNQ96H22 339 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 MBOAT7Q96N66 472 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 SLC4A9Q96Q91 983 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 G6PC3Q9BUM1 346 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 MRI1Q9BV20 369 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 WDR18Q9BV38 432 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 TAPBPLQ9BX59 468 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 BCL2L14Q9BZR8 327 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 PCIF1Q9H4Z3 704 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 THAP1Q9NVV9 213 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 MKS1Q9NXB0 559 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 ATPIF1Q9UII2 106 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 DOCK4Q8N1I0 1966 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 CHURC1-FNTBB4DL54 471 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 H3BN98 237 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 FOXE1O00358 373 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 UBFD1O14562 309 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 TSPAN6O43657 245 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 CREBL2O60519 120 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 RSL1D1O76021 490 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 RECQL4O94761 1208 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 PGLSO95336 258 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 OLFM2O95897 454 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 ALADP13716 330 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 DPEP1P16444 411 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 FASP25445 335 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 EIF2S3P41091 472 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 GRM5P41594 1212 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 NAGLUP54802 743 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 HNRNPKP61978 463 aaKnown RBP eCLIP2.71□□□□□ -1.98
CHD9-202ENST00000398510 SEMA5AQ13591 1074 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 SLC25A52Q3SY17 297 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 OTUD3Q5T2D3 398 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 ZNF776Q68DI1 518 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 SLC9A4Q6AI14 798 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 BAIAP2L2Q6UXY1 529 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 LANCL3Q6ZV70 420 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 RNF135Q8IUD6 432 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 PLXDC1Q8IUK5 500 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 PPM1NQ8N819 430 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 SLC35G2Q8TBE7 412 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 PHOSPHO2Q8TCD6 241 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 MKL1Q969V6 931 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 SEC16BQ96JE7 1060 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 FCRL2Q96LA5 508 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 PPP1R10Q96QC0 940 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 TSC22D3Q99576 134 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 MGME1Q9BQP7 344 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 ACBD6Q9BR61 282 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 BBS2Q9BXC9 721 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 C1QTNF1Q9BXJ1 281 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 SAP130Q9H0E3 1048 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 MAGEH1Q9H213 219 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 LHX5Q9H2C1 402 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 CUEDC1Q9NWM3 386 aaPredicted RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 LYARQ9NX58 379 aaKnown RBP2.71□□□□□ -1.98
CHD9-202ENST00000398510 TSPAN16Q9UKR8 245 aa2.71□□□□□ -1.98
CHD9-202ENST00000398510 A0A096LPK6 155 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms