RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 TRIM74Q86UV6 250 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 NLRP8Q86W28 1048 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 RBFAQ8N0V3 343 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 TRAM1L1Q8N609 369 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 FAM181AQ8N9Y4 354 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 BBOF1Q8ND07 529 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 STYXQ8WUJ0 223 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 ZNF778Q96MU6 729 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 PWWP2AQ96N64 755 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 ZSCAN5AQ9BUG6 496 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 LGR4Q9BXB1 951 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 TEX101Q9BY14 249 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 PHPT1Q9NRX4 125 aaPredicted RBP25.2■■□□□ 1.62
U2AF1-203ENST00000398137 GRHL1Q9NZI5 618 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 WHRNQ9P202 907 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 SLC2A6Q9UGQ3 507 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 ZFYVE26Q68DK2 2539 aa25.2■■□□□ 1.62
U2AF1-203ENST00000398137 ZNF106Q9H2Y7 1883 aaKnown RBP25.19■■□□□ 1.62
U2AF1-203ENST00000398137 ASXL3Q9C0F0 2248 aa25.19■■□□□ 1.62
U2AF1-203ENST00000398137 CACNB4O00305 520 aaPredicted RBP25.19■■□□□ 1.62
U2AF1-203ENST00000398137 TOR1BO14657 336 aa25.19■■□□□ 1.62
U2AF1-203ENST00000398137 GPR39O43194 453 aa25.19■■□□□ 1.62
U2AF1-203ENST00000398137 PYGLP06737 847 aa25.19■■□□□ 1.62
U2AF1-203ENST00000398137 JUNDP17535 347 aa25.19■■□□□ 1.62
U2AF1-203ENST00000398137 KIAA1024LP59773 190 aa25.19■■□□□ 1.62
U2AF1-203ENST00000398137 CALCOCO2Q13137 446 aa25.19■■□□□ 1.62
U2AF1-203ENST00000398137 CASC4Q6P4E1 433 aa25.19■■□□□ 1.62
U2AF1-203ENST00000398137 CHRAC1Q9NRG0 131 aa25.19■■□□□ 1.62
U2AF1-203ENST00000398137 URB1O60287 2271 aaKnown RBP25.18■■□□□ 1.62
U2AF1-203ENST00000398137 ESYT3A0FGR9 886 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 SMAPO00193 183 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 NDC80O14777 642 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 PRAMEF1O95521 474 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 MYCLP1P12525 358 aaPredicted RBP25.18■■□□□ 1.62
U2AF1-203ENST00000398137 HADHAP40939 763 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 ARSDP51689 593 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 DAB2P98082 770 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 FNBP1LQ5T0N5 605 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 MACC1Q6ZN28 852 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 CACTIN-AS1Q8N1I8 211 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 AGGF1Q8N302 714 aaeCLIP25.18■■□□□ 1.62
U2AF1-203ENST00000398137 DCBLD1Q8N8Z6 715 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 OR13J1Q8NGT2 312 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 SAMD15Q9P1V8 674 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 CSNK1G3Q9Y6M4 447 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 NBEAQ8NFP9 2946 aa25.18■■□□□ 1.62
U2AF1-203ENST00000398137 ITPR1Q14643 2758 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 SDR42E2A6NKP2 422 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 AQP9O43315 295 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 BANF1O75531 89 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 HTR1BP28222 390 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 XIAPP98170 497 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 GUCY2DQ02846 1103 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 PTK2BQ14289 1009 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 TRADDQ15628 312 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 SKIDA1Q1XH10 827 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 ATP13A5Q4VNC0 1218 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 DNAJC21Q5F1R6 531 aaKnown RBP25.17■■□□□ 1.62
U2AF1-203ENST00000398137 DOK6Q6PKX4 331 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 C19orf48Q6RUI8 117 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 NLRP9Q7RTR0 991 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 PTCD2Q8WV60 388 aaKnown RBP25.17■■□□□ 1.62
U2AF1-203ENST00000398137 HIC2Q96JB3 615 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 WDR92Q96MX6 357 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 C19orf43Q9BQ61 176 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 KIFC1Q9BW19 673 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 FRMD8Q9BZ67 464 aaPredicted RBP25.17■■□□□ 1.62
U2AF1-203ENST00000398137 SUDS3Q9H7L9 328 aaPredicted RBP25.17■■□□□ 1.62
U2AF1-203ENST00000398137 APPL1Q9UKG1 709 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 CNOT6Q9ULM6 557 aaKnown RBP25.17■■□□□ 1.62
U2AF1-203ENST00000398137 SOX13Q9UN79 622 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 MAD1L1Q9Y6D9 718 aa25.17■■□□□ 1.62
U2AF1-203ENST00000398137 NEMP2A6NFY4 417 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 UGT1A9O60656 530 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 SRP72O76094 671 aaKnown RBP25.16■■□□□ 1.62
U2AF1-203ENST00000398137 HOXC4P09017 264 aaPredicted RBP25.16■■□□□ 1.62
U2AF1-203ENST00000398137 UGT1A6P19224 532 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 UGT1A1P22309 533 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 UGT1A4P22310 534 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 PSMA3P25788 255 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 NMBRP28336 390 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 MC4RP32245 332 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 UGT1A3P35503 534 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 UGT1A5P35504 534 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 PEX6Q13608 980 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 HIF1AQ16665 826 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 DEFB133Q30KQ1 61 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 BBS9Q3SYG4 887 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 MSS51Q4VC12 460 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 CDCP2Q5VXM1 449 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 KCTD16Q68DU8 428 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 PDPK2PQ6A1A2 396 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 CES3Q6UWW8 571 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 LMX1AQ8TE12 382 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 GLYATL1Q969I3 302 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 CDKN2AIPNLQ96HQ2 116 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 TBATAQ96M53 351 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 TRIM56Q9BRZ2 755 aaKnown RBP25.16■■□□□ 1.62
U2AF1-203ENST00000398137 LRRC61Q9BV99 259 aa25.16■■□□□ 1.62
U2AF1-203ENST00000398137 CLPBQ9H078 707 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms