RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 RPS6KA3P51812 740 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 SP3Q02447 781 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.69□□□□□ -0.7
CCDC40-204ENST00000397545 TOP3AQ13472 1001 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-204ENST00000397545 DUSP28Q4G0W2 176 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 NANOGNBQ7Z5D8 188 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 THAP5Q7Z6K1 395 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 GATAD2AQ86YP4 633 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 OR52J3Q8NH60 311 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 CENPNQ96H22 339 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-204ENST00000397545 PEBP4Q96S96 227 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 COQ7Q99807 217 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 PKP2Q99959 881 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 ZDHHC2Q9UIJ5 367 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 ZNF490Q9ULM2 529 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-204ENST00000397545 BTBD19C9JJ37 291 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 KPNA5O15131 536 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 NOBOXO60393 691 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 KPNA6O60684 536 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 OR6B1O95007 311 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 H6PDO95479 791 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 CAPN1P07384 714 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 CHRM5P08912 532 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-204ENST00000397545 CLTBP09497 229 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 HPCAL1P37235 193 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 ANXA11P50995 505 aaKnown RBP10.69□□□□□ -0.7
CCDC40-204ENST00000397545 CSNK2BP67870 215 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 BTG3Q14201 252 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-204ENST00000397545 ZNF554Q86TJ5 538 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 DPP10Q8N608 796 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 PPTC7Q8NI37 304 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 HNRNPABQ99729 332 aaKnown RBP10.69□□□□□ -0.7
CCDC40-204ENST00000397545 SLC39A8Q9C0K1 460 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 RNF39Q9H2S5 420 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 CRISPLD1Q9H336 500 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 PTTG2Q9NZH5 202 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 ZNF624Q9P2J8 865 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-204ENST00000397545 MAGEL2Q9UJ55 1249 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 RPS6KA6Q9UK32 745 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 FZD10Q9ULW2 581 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 ZNF646O15015 1829 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-204ENST00000397545 A0A1W2PQ67 120 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 CCDC85CA6NKD9 419 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 EFCAB14O75071 495 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 SLC25A14O95258 325 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-204ENST00000397545 CLIC3O95833 236 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 CKBP12277 381 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 GNPDA1P46926 289 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 FLT3LGP49771 235 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 SPIBQ01892 262 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 SIX1Q15475 284 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-204ENST00000397545 TIMM50Q3ZCQ8 353 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 TSTD2Q5T7W7 516 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 NCBP2-AS2Q69YL0 99 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 NAPRTQ6XQN6 538 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 AHSA2Q719I0 299 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 EIF3MQ7L2H7 374 aaKnown RBP10.69□□□□□ -0.7
CCDC40-204ENST00000397545 CAMKK1Q8N5S9 505 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 WDR48Q8TAF3 677 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 SIGLEC10Q96LC7 697 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 COPS8Q99627 209 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 ADAM7Q9H2U9 754 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 SYNDIG1Q9H7V2 258 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 NMUR1Q9HB89 426 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 RAD18Q9NS91 495 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 GIMAP2Q9UG22 337 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 GNPTGQ9UJJ9 305 aa10.69□□□□□ -0.7
CCDC40-204ENST00000397545 FAM159BA6NKW6 160 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 HOXA2O43364 376 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 DLX3O60479 287 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 RPP40O75818 363 aaKnown RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 ANGPTL1O95841 491 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 IL12AP29459 219 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 OR1D2P34982 312 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 ATP12AP54707 1039 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 CDC42P60953 191 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 SLC18A2Q05940 514 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 LCP2Q13094 533 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 RFX4Q33E94 735 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 KCTD8Q6ZWB6 473 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 PLD6Q8N2A8 252 aaKnown RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 SLC7A6OSQ96CW6 309 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 HMCESQ96FZ2 354 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 MYH9P35579 1960 aaKnown RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 BBIP1A8MTZ0 92 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 OR10H3O60404 316 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 GOT2P00505 430 aaKnown RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 RPL9P32969 192 aaKnown RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 TUSC3Q13454 348 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 SETMARQ53H47 684 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 USP45Q70EL2 814 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 OAZ3Q9UMX2 235 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 PRKAB1Q9Y478 270 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 MYO18AQ92614 2054 aaKnown RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 NDST3O95803 873 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 TBX18O95935 607 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 AHSGP02765 367 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 AZGP1P25311 298 aaKnown RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 CDK9P50750 372 aaKnown RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 MFSD4BQ5TF39 518 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms