RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 B3GNT4Q9C0J1 378 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 SARS2Q9NP81 518 aaKnown RBP13.79□□□□□ -0.2
SEC13-204ENST00000397099 IL17CQ9P0M4 197 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 ATXN10Q9UBB4 475 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 RABGEF1Q9UJ41 708 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 SATB2Q9UPW6 733 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 IGSF10Q6WRI0 2623 aa13.79□□□□□ -0.2
SEC13-204ENST00000397099 PLD2O14939 933 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 STX7O15400 261 aaKnown RBP13.78□□□□□ -0.2
SEC13-204ENST00000397099 SLC4A1P02730 911 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 CCDC175P0C221 793 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 STIP1P31948 543 aaKnown RBP13.78□□□□□ -0.2
SEC13-204ENST00000397099 PDX1P52945 283 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 B4GALNT1Q00973 533 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 ZFP36L1Q07352 338 aaKnown RBP13.78□□□□□ -0.2
SEC13-204ENST00000397099 KLF1Q13351 362 aaPredicted RBP13.78□□□□□ -0.2
SEC13-204ENST00000397099 TRA2AQ13595 282 aaKnown RBP eCLIP13.78□□□□□ -0.2
SEC13-204ENST00000397099 TAF1AQ15573 450 aaPredicted RBP13.78□□□□□ -0.2
SEC13-204ENST00000397099 PARP6Q2NL67 630 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 MAP9Q49MG5 647 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 SEL1L2Q5TEA6 688 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 BROXQ5VW32 411 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 ALS2CLQ60I27 953 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 RAB11FIP2Q7L804 512 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 SLC9B2Q86UD5 537 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 KLHDC8BQ8IXV7 354 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 FBXO39Q8N4B4 442 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 TTC30BQ8N4P2 665 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 Q8N9G6 341 aaPredicted RBP13.78□□□□□ -0.2
SEC13-204ENST00000397099 BLOC1S5Q8TDH9 187 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 FCRL3Q96P31 734 aaPredicted RBP13.78□□□□□ -0.2
SEC13-204ENST00000397099 OR2AG1Q9H205 316 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 ARNT2Q9HBZ2 717 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 ASCL3Q9NQ33 180 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 SMOXQ9NWM0 555 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 PCDHGA7Q9Y5G6 932 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 SPO11Q9Y5K1 396 aa13.78□□□□□ -0.2
SEC13-204ENST00000397099 DNMT3AQ9Y6K1 912 aaPredicted RBP13.78□□□□□ -0.2
SEC13-204ENST00000397099 OAS3Q9Y6K5 1087 aaKnown RBP13.78□□□□□ -0.2
SEC13-204ENST00000397099 ZNF106Q9H2Y7 1883 aaKnown RBP13.78□□□□□ -0.2
SEC13-204ENST00000397099 GLYATL1P3A0A0U1RQE8 302 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 HGSO14964 777 aaPredicted RBP13.77□□□□□ -0.21
SEC13-204ENST00000397099 DDX3YO15523 660 aaKnown RBP13.77□□□□□ -0.21
SEC13-204ENST00000397099 CDK14O94921 469 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 FTCDO95954 541 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 F3P13726 295 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 ZNF8P17098 575 aaPredicted RBP13.77□□□□□ -0.21
SEC13-204ENST00000397099 LPOP22079 712 aaPredicted RBP13.77□□□□□ -0.21
SEC13-204ENST00000397099 ALDH4A1P30038 563 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 ADRA1AP35348 466 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 HADHAP40939 763 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 EPHA4P54764 986 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 MAZP56270 477 aaKnown RBP13.77□□□□□ -0.21
SEC13-204ENST00000397099 IYDQ6PHW0 289 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 ARHGEF18Q6ZSZ5 1173 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 ADGRG6Q86SQ4 1221 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 CLEC14AQ86T13 490 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 SPACA3Q8IXA5 215 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 RBM12BQ8IXT5 1001 aaKnown RBP13.77□□□□□ -0.21
SEC13-204ENST00000397099 SLC25A41Q8N5S1 370 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 OR4D9Q8NGE8 314 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 OR10G6Q8NH81 332 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 GDAP1Q8TB36 358 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 PTCD2Q8WV60 388 aaKnown RBP13.77□□□□□ -0.21
SEC13-204ENST00000397099 HEXDCQ8WVB3 486 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 AHCYL2Q96HN2 611 aaKnown RBP13.77□□□□□ -0.21
SEC13-204ENST00000397099 UBL7Q96S82 380 aaPredicted RBP13.77□□□□□ -0.21
SEC13-204ENST00000397099 SLC38A3Q99624 504 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 UCK1Q9HA47 277 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 EPB41L5Q9HCM4 733 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 IL26Q9NPH9 171 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 KCNK4Q9NYG8 393 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 TRIM10Q9UDY6 481 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 ST14Q9Y5Y6 855 aa13.77□□□□□ -0.21
SEC13-204ENST00000397099 ERI2A8K979 691 aaKnown RBP13.76□□□□□ -0.21
SEC13-204ENST00000397099 CDRT15L2A8MXV6 281 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 AURKAO14965 403 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 DUX1O43812 170 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 JMJD7P0C870 316 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 ACP5P13686 325 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 ZNF7P17097 686 aaPredicted RBP13.76□□□□□ -0.21
SEC13-204ENST00000397099 PSMB4P28070 264 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 CXADRP78310 365 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 HHEXQ03014 270 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 TLE3Q04726 772 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 TMEM115Q12893 351 aaPredicted RBP13.76□□□□□ -0.21
SEC13-204ENST00000397099 LAMB3Q13751 1172 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 INSCQ1MX18 579 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 ATP13A5Q4VNC0 1218 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.76□□□□□ -0.21
SEC13-204ENST00000397099 TMEM164Q5U3C3 297 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 WASH2PQ6VEQ5 465 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 LINC00523Q86TU6 105 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 DDHD1Q8NEL9 900 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 TRIM58Q8NG06 486 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 SLC35B2Q8TB61 432 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 SLC37A2Q8TED4 501 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 KCNE4Q8WWG9 221 aa13.76□□□□□ -0.21
SEC13-204ENST00000397099 BBC3Q96PG8 261 aaPredicted RBP13.76□□□□□ -0.21
SEC13-204ENST00000397099 FICDQ9BVA6 458 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms