RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SNRNP40Q96DI7 357 aaKnown RBP8.31□□□□□ -1.08
SCFD1-202ENST00000396629 MCEEQ96PE7 176 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 SMIM14Q96QK8 99 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 RANBP9Q96S59 729 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 SMAD5Q99717 465 aaKnown RBP8.31□□□□□ -1.08
SCFD1-202ENST00000396629 NUDT9Q9BW91 350 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 RAB33BQ9H082 229 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 CARD9Q9H257 536 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 PDE7BQ9NP56 450 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 SCHIP1Q9P0W5 487 aaPredicted RBP8.31□□□□□ -1.08
SCFD1-202ENST00000396629 MAP10Q9P2G4 905 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 APCP25054 2843 aa8.31□□□□□ -1.08
SCFD1-202ENST00000396629 ANKRD62A6NC57 917 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 GRID2O43424 1007 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 NUAK1O60285 661 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 RASSF9O75901 435 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 VIPP01282 170 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 SOX5P35711 763 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 ITGA1P56199 1179 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 JAM2P57087 298 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 NDUFAF2Q8N183 169 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 AOPEPQ8N6M6 819 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 MARVELD3Q96A59 401 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 SLC41A2Q96JW4 573 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 SNRNP25Q9BV90 132 aaKnown RBP8.3□□□□□ -1.08
SCFD1-202ENST00000396629 ASF1BQ9NVP2 202 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 ZNF624Q9P2J8 865 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-202ENST00000396629 RARRES3Q9UL19 164 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 ENTPD4Q9Y227 616 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 ADGRG1Q9Y653 693 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 PDZD2O15018 2839 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 CSMD1Q96PZ7 3565 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 A0A0J9YYE9 177 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 ANKUB1A6NFN9 424 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 TRBC1P01850 177 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 FOLR1P15328 257 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 CAPZBP47756 277 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 ZNF135P52742 658 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-202ENST00000396629 MAXP61244 160 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 PDAP1Q13442 181 aaKnown RBP8.3□□□□□ -1.08
SCFD1-202ENST00000396629 DPYSQ14117 519 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 TPD52L1Q16890 204 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-202ENST00000396629 PLEKHN1Q494U1 663 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-202ENST00000396629 CRB2Q5IJ48 1285 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 ZNF517Q6ZMY9 492 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-202ENST00000396629 PHYKPLQ8IUZ5 450 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 BBS5Q8N3I7 341 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 ARFGAP1Q8N6T3 406 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 RSC1A1Q92681 617 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 ZDHHC12Q96GR4 267 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 PEBP4Q96S96 227 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 BARD1Q99728 777 aaKnown RBP8.3□□□□□ -1.08
SCFD1-202ENST00000396629 C5AR2Q9P296 337 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 DNPEPQ9ULA0 475 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 G3BP2Q9UN86 482 aaKnown RBP8.3□□□□□ -1.08
SCFD1-202ENST00000396629 PCSK5Q92824 1860 aa8.3□□□□□ -1.08
SCFD1-202ENST00000396629 FADS2P1A8MWK0 482 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 MAFKO60675 156 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 TMEM63AO94886 807 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 DESP17661 470 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 TUBB3Q13509 450 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 HENMT1Q5T8I9 393 aaKnown RBP8.29□□□□□ -1.08
SCFD1-202ENST00000396629 IZUMO3Q5VZ72 239 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 FAM92BQ6ZTR7 304 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 CYP4V2Q6ZWL3 525 aaPredicted RBP8.29□□□□□ -1.08
SCFD1-202ENST00000396629 PSTKQ8IV42 348 aaKnown RBP8.29□□□□□ -1.08
SCFD1-202ENST00000396629 IQCKQ8N0W5 287 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 MLKLQ8NB16 471 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 SIDT2Q8NBJ9 832 aaKnown RBP8.29□□□□□ -1.08
SCFD1-202ENST00000396629 UBXN4Q92575 508 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 FAM207AQ9NSI2 230 aaPredicted RBP8.29□□□□□ -1.08
SCFD1-202ENST00000396629 KLC4Q9NSK0 619 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 POT1Q9NUX5 634 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 CWC15Q9P013 229 aaKnown RBP8.29□□□□□ -1.08
SCFD1-202ENST00000396629 ATXN10Q9UBB4 475 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 IGHV5-51A0A0C4DH38 117 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 ZNF185O15231 689 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 CLDN7O95471 211 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 JCHAINP01591 159 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 RAB40ALP0C0E4 278 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 ZNF8P17098 575 aaPredicted RBP8.29□□□□□ -1.08
SCFD1-202ENST00000396629 MMP13P45452 471 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 PDE1BQ01064 536 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 ACY1Q03154 408 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 NAA30Q147X3 362 aaPredicted RBP8.29□□□□□ -1.08
SCFD1-202ENST00000396629 DCUN1D2Q6PH85 259 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 ABRAXAS1Q6UWZ7 409 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 TRIM48Q8IWZ4 208 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 RBM12BQ8IXT5 1001 aaKnown RBP8.29□□□□□ -1.08
SCFD1-202ENST00000396629 CISD2Q8N5K1 135 aaKnown RBP8.29□□□□□ -1.08
SCFD1-202ENST00000396629 TEX26Q8N6G2 289 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 ZNF514Q96K75 400 aaPredicted RBP8.29□□□□□ -1.08
SCFD1-202ENST00000396629 LYSMD1Q96S90 227 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 UNKQ9C0B0 810 aaKnown RBP8.29□□□□□ -1.08
SCFD1-202ENST00000396629 SLC40A1Q9NP59 571 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 WASH6PQ9NQA3 447 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 GPR83Q9NYM4 423 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 SLC23A2Q9UGH3 650 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 SIK3Q9Y2K2 1263 aa8.29□□□□□ -1.08
SCFD1-202ENST00000396629 PIKFYVEQ9Y2I7 2098 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 271.8 ms