RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 C11orf49Q9H6J7 331 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 ABI3Q9P2A4 366 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 MTRRQ9UBK8 725 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 CNOT6Q9ULM6 557 aaKnown RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 KCNU1A8MYU2 1149 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 AQP1P29972 269 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 RFX4Q33E94 735 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 FAM91A1Q658Y4 838 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 LIN54Q6MZP7 749 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 TSPAN14Q8NG11 270 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 XAGE5Q8WWM1 108 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 QKIQ96PU8 341 aaKnown RBP eCLIP10.32□□□□□ -0.765e-7■■■■□ 24
COL4A6-203ENST00000394872 MAGEH1Q9H213 219 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 PHF11Q9UIL8 331 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 FBXW2Q9UKT8 454 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 PCDHGC4Q9Y5F7 938 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 FAM92AA1XBS5 289 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 SOWAHBA6NEL2 793 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 DHX15O43143 795 aaKnown RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 SSNA1O43805 119 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 UNC5CO95185 931 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 TCEA1P23193 301 aaKnown RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 ASMTP46597 345 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 RABGGTBP53611 331 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 ITGADQ13349 1161 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 TIGD2Q4W5G0 525 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 CERS6Q6ZMG9 384 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 BEND5Q7L4P6 421 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 TAC4Q86UU9 113 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 DAW1Q8N136 415 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 C2orf15Q8WU43 125 aaKnown RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 MIOSQ9NXC5 875 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 SSR3Q9UNL2 185 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 FAM86C2PA6NEL3 165 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 SAGP10523 405 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 MPSTP25325 297 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 RPIAP49247 311 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 FPGSQ05932 587 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 ARMCX6Q7L4S7 300 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 AMER2Q8N7J2 671 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 KBTBD8Q8NFY9 601 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 KLK6Q92876 244 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 SCLYQ96I15 445 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 UBAP1Q9NZ09 502 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 NUDT4Q9NZJ9 180 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 SAMD4AQ9UPU9 718 aaKnown RBP10.32□□□□□ -0.76
COL4A6-203ENST00000394872 STXBP5LQ9Y2K9 1186 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 MAP4K5Q9Y4K4 846 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 ATRNO75882 1429 aa10.32□□□□□ -0.76
COL4A6-203ENST00000394872 SLC35G6P0C7Q6 338 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 ANPEPP15144 967 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 HOXC12P31275 282 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 DRG2P55039 364 aaKnown RBP10.31□□□□□ -0.76
COL4A6-203ENST00000394872 PTGES3Q15185 160 aaKnown RBP10.31□□□□□ -0.76
COL4A6-203ENST00000394872 RFTN2Q52LD8 501 aaPredicted RBP10.31□□□□□ -0.76
COL4A6-203ENST00000394872 AKIRIN2Q53H80 203 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 POP5Q969H6 163 aaKnown RBP10.31□□□□□ -0.76
COL4A6-203ENST00000394872 PMEPA1Q969W9 287 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 RPL10LQ96L21 214 aaKnown RBP10.31□□□□□ -0.76
COL4A6-203ENST00000394872 ZNF304Q9HCX3 659 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 ARHGEF4Q9NR80 690 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 CHRAC1Q9NRG0 131 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 BBIP1A8MTZ0 92 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 ENPP3O14638 875 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 SIN3BO75182 1162 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 GNSP15586 552 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 IL12BP29460 328 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 NDST2P52849 883 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 TMEM220Q6QAJ8 160 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 GK5Q6ZS86 529 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 AMIGO2Q86SJ2 522 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 SERPINA9Q86WD7 417 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 HPS6Q86YV9 775 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 GAL3ST4Q96RP7 486 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 TRMOQ9BU70 441 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 NOL11Q9H8H0 719 aaKnown RBP10.31□□□□□ -0.76
COL4A6-203ENST00000394872 MAGEL2Q9UJ55 1249 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 CCDC182A6NF36 153 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 STK16O75716 305 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 IPO13O94829 963 aaKnown RBP10.31□□□□□ -0.76
COL4A6-203ENST00000394872 PDK3Q15120 406 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 MED22Q15528 200 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 GCNT6Q5T4J0 391 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 B3GNT6Q6ZMB0 384 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 SLC26A9Q7LBE3 791 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 KBTBD2Q8IY47 623 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 PHC3Q8NDX5 983 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 TRIM63Q969Q1 353 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 NXNL1Q96CM4 212 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 TCF12Q99081 682 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 GPER1Q99527 375 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 HNRNPABQ99729 332 aaKnown RBP10.31□□□□□ -0.76
COL4A6-203ENST00000394872 LRMDAQ9H2I8 198 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 SRMSQ9H3Y6 488 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 COPS7AQ9UBW8 275 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 FAM155BO75949 473 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 CLUP10909 449 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 POLR2JP52435 117 aaKnown RBP10.31□□□□□ -0.76
COL4A6-203ENST00000394872 MAPK12P53778 367 aa10.31□□□□□ -0.76
COL4A6-203ENST00000394872 LILRA4P59901 499 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms