RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 DNAJC28Q9NX36 388 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 PACSIN3Q9UKS6 424 aa13.34□□□□□ -0.27
USP49-203ENST00000394253 CTSEP14091 401 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 CD79BP40259 229 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 RAB10P61026 200 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 AMHR2Q16671 573 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 FAM153CQ494X1 144 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 PAQR7Q86WK9 346 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 ELMOD2Q8IZ81 293 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 AP2M1Q96CW1 435 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 SERPINB11Q96P15 392 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 NPAS2Q99743 824 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 SCN2BO60939 215 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 CABYRO75952 493 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 SSTR1P30872 391 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 CDKN2CP42773 168 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 RPL38P63173 70 aaKnown RBP13.33□□□□□ -0.27
USP49-203ENST00000394253 AMIGO2Q86SJ2 522 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 TBC1D10CQ8IV04 446 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 OR51D1Q8NGF3 324 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 RAB21Q9UL25 225 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 GRIN2DO15399 1336 aa13.33□□□□□ -0.27
USP49-203ENST00000394253 E2F3O00716 465 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 HSPA12AO43301 675 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 CRTC2Q53ET0 693 aaPredicted RBP13.33□□□□□ -0.28
USP49-203ENST00000394253 S100A14Q9HCY8 104 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 KCNE2Q9Y6J6 123 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 ARPC2O15144 300 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 OIP5O43482 229 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 FASTKD3Q14CZ7 662 aaKnown RBP13.33□□□□□ -0.28
USP49-203ENST00000394253 CCNYL2Q5T2Q4 361 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 CYP4V2Q6ZWL3 525 aaPredicted RBP13.33□□□□□ -0.28
USP49-203ENST00000394253 TATDN2Q93075 761 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 KAT8Q9H7Z6 458 aaKnown RBP13.33□□□□□ -0.28
USP49-203ENST00000394253 SH3PXD2BA1X283 911 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 H6PDO95479 791 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 UROSP10746 265 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 CFL1P23528 166 aaKnown RBP13.33□□□□□ -0.28
USP49-203ENST00000394253 CHMP24386 653 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 CLCA4Q14CN2 919 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 XKR4Q5GH76 650 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 HID1Q8IV36 788 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 PPCDCQ96CD2 204 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 PUS3Q9BZE2 481 aaKnown RBP13.33□□□□□ -0.28
USP49-203ENST00000394253 XPNPEP3Q9NQH7 507 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 SLC27A6Q9Y2P4 619 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 PCDH1Q08174 1060 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 SLC30A6Q6NXT4 461 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 CHSY3Q70JA7 882 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 MB21D2Q8IYB1 491 aaPredicted RBP13.33□□□□□ -0.28
USP49-203ENST00000394253 SEPT12Q8IYM1 358 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.33□□□□□ -0.28
USP49-203ENST00000394253 CARNS1A5YM72 827 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 UGT1A9O60656 530 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 UGT1A6P19224 532 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 UGT1A1P22309 533 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 UGT1A4P22310 534 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 ADRA1DP25100 572 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 UGT1A3P35503 534 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 NAE1Q13564 534 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 GPR65Q8IYL9 337 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 DNAAF1Q8NEP3 725 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 UGT1A7Q9HAW7 530 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 UGT1A10Q9HAW8 530 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 UGT1A8Q9HAW9 530 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 MTMR4Q9NYA4 1195 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 ATP10AO60312 1499 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 NDUFS2O75306 463 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 MAP3K8P41279 467 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 GRAPQ13588 217 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 TEAD4Q15561 434 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 BATFQ16520 125 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 STXBP5Q5T5C0 1151 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 METTL25Q8N6Q8 603 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 GRAPLQ8TC17 118 aaPredicted RBP13.33□□□□□ -0.28
USP49-203ENST00000394253 ZNF347Q96SE7 839 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 TLL2Q9Y6L7 1015 aa13.33□□□□□ -0.28
USP49-203ENST00000394253 APOC4-APOC2K7ER74 178 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 GSC2O15499 205 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 ENTPD6O75354 484 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 APOC2P02655 101 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 LAMP2P13473 410 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 CCDC71Q8IV32 467 aaPredicted RBP13.32□□□□□ -0.28
USP49-203ENST00000394253 PHC3Q8NDX5 983 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 WASF3Q9UPY6 502 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 GPR182O15218 404 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 ZNF20P17024 532 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 VANGL1Q8TAA9 524 aaPredicted RBP13.32□□□□□ -0.28
USP49-203ENST00000394253 MBOAT7Q96N66 472 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 OR10A4Q9H209 315 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 NR2E1Q9Y466 385 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 PCDHGA8Q9Y5G5 932 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 WASHC1A8K0Z3 465 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 WASH3PC4AMC7 463 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 PSMD9O00233 223 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 ITPKBP27987 946 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 RPL21P46778 160 aaKnown RBP13.32□□□□□ -0.28
USP49-203ENST00000394253 ARFRP1Q13795 201 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 PTPAQ15257 358 aa13.32□□□□□ -0.28
USP49-203ENST00000394253 SCGB2B2Q4G0G5 96 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms