RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 SLC30A1Q9Y6M5 507 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 DOPEY1Q5JWR5 2465 aa15.16■□□□□ 0.02
CHMP3-202ENST00000393773 MATN3O15232 486 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 UBXN7O94888 489 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 NDUFA10O95299 355 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 MMP2P08253 660 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 FGF5P12034 268 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 TYRP1P17643 537 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 CA4P22748 312 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 NOP2P46087 812 aaKnown RBP15.15■□□□□ 0.02
CHMP3-202ENST00000393773 SEPHS1P49903 392 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 ZNF165P49910 485 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 ARSEP51690 589 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 PIGHQ14442 188 aaPredicted RBP15.15■□□□□ 0.02
CHMP3-202ENST00000393773 IL11RAQ14626 422 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 ESPL1Q14674 2120 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 PAFAH1B3Q15102 231 aaKnown RBP15.15■□□□□ 0.02
CHMP3-202ENST00000393773 QPCTQ16769 361 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 PLA2G4EQ3MJ16 856 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 C4orf17Q53FE4 359 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 TIGD7Q6NT04 549 aaPredicted RBP15.15■□□□□ 0.02
CHMP3-202ENST00000393773 TEX19Q8NA77 164 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 RSC1A1Q92681 617 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 EID2BQ96D98 161 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 BTBD6Q96KE9 485 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 OSGEPL1Q9H4B0 414 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 FAM83DQ9H4H8 585 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 ARFGAP3Q9NP61 516 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 KLC4Q9NSK0 619 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 PKD2L2Q9NZM6 624 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 ZNF624Q9P2J8 865 aaPredicted RBP15.15■□□□□ 0.02
CHMP3-202ENST00000393773 TLK1Q9UKI8 766 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 PCDHB3Q9Y5E6 796 aa15.15■□□□□ 0.02
CHMP3-202ENST00000393773 CDC14CA4D256 554 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 RGSL1A5PLK6 1076 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 CHUKO15111 745 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 KIF1CO43896 1103 aaKnown RBP15.14■□□□□ 0.01
CHMP3-202ENST00000393773 DNAJB5O75953 348 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 TIAF1O95411 115 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 XRCC1P18887 633 aaPredicted RBP15.14■□□□□ 0.01
CHMP3-202ENST00000393773 CDK11BP21127 795 aaKnown RBP15.14■□□□□ 0.01
CHMP3-202ENST00000393773 CES1P23141 567 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 SLC19A1P41440 591 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 DNASE1L3Q13609 305 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 DPYSL3Q14195 570 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 KRT81Q14533 505 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 ZNF569Q5MCW4 686 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 ZNF648Q5T619 568 aaPredicted RBP15.14■□□□□ 0.01
CHMP3-202ENST00000393773 CAPRIN2Q6IMN6 1127 aaKnown RBP15.14■□□□□ 0.01
CHMP3-202ENST00000393773 CRTC3Q6UUV7 619 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 RASGRP3Q8IV61 690 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 APLFQ8IW19 511 aaPredicted RBP15.14■□□□□ 0.01
CHMP3-202ENST00000393773 CT55Q8WUE5 264 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 BRD8Q9H0E9 1235 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 OR2AG1Q9H205 316 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 LRRC4CQ9HCJ2 640 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 ANO10Q9NW15 660 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 RBM22Q9NW64 420 aaKnown RBP eCLIP15.14■□□□□ 0.01
CHMP3-202ENST00000393773 DTLQ9NZJ0 730 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 NFKBIL1Q9UBC1 381 aaPredicted RBP15.14■□□□□ 0.01
CHMP3-202ENST00000393773 SLC23A2Q9UGH3 650 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 KCND3Q9UK17 655 aa15.14■□□□□ 0.01
CHMP3-202ENST00000393773 GPR89AB7ZAQ6 455 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 CREG1O75629 220 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 MTA2O94776 668 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 GPR89BP0CG08 455 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 BRAFP15056 766 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 CCNCP24863 283 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 DCDC1P59894 354 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 KLHL30Q0D2K2 578 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 IFI16Q16666 785 aaKnown RBP15.13■□□□□ 0.01
CHMP3-202ENST00000393773 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.13■□□□□ 0.01
CHMP3-202ENST00000393773 ANKRD20A8PQ5CZ79 823 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 ADGRG6Q86SQ4 1221 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 LRRN4Q8WUT4 740 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 KLHL6Q8WZ60 621 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 ELMO2Q96JJ3 720 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 TSGA13Q96PP4 275 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 TRIM55Q9BYV6 548 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 TWSG1Q9GZX9 223 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 RTN4Q9NQC3 1192 aaKnown RBP15.13■□□□□ 0.01
CHMP3-202ENST00000393773 POT1Q9NUX5 634 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 PLEKHB1Q9UF11 243 aaPredicted RBP15.13■□□□□ 0.01
CHMP3-202ENST00000393773 LNPEPQ9UIQ6 1025 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 ANAPC7Q9UJX3 599 aa15.13■□□□□ 0.01
CHMP3-202ENST00000393773 KATNA1O75449 491 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 SPAG6O75602 509 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 RASSF9O75901 435 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 RECKO95980 971 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 VIPP01282 170 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 RNF224P0DH78 156 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 SKILP12757 684 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 GNLYP22749 145 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 SEMA5AQ13591 1074 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 LAMB3Q13751 1172 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 GPR18Q14330 331 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 SEPT7Q16181 437 aaKnown RBP15.12■□□□□ 0.01
CHMP3-202ENST00000393773 INSCQ1MX18 579 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 CCDC183Q5T5S1 534 aa15.12■□□□□ 0.01
CHMP3-202ENST00000393773 ALS2CLQ60I27 953 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms