RNA–Protein interactions for RNA: ENST00000391143.1

SNORA48.5-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.5-201ENST00000391143 PCDHGA6Q9Y5G7 932 aa3.19□□□□□ -1.9
SNORA48.5-201ENST00000391143 PRRC2AP48634 2157 aaKnown RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 TMEM202A6NGA9 273 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 TMEM110-MUSTN1A8MSY1 372 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 H3BQV1 296 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 C19orf84I3L1E1 186 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 E2F3O00716 465 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 PRRG2O14669 202 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 MAPK13O15264 365 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 PPM1DO15297 605 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 PMM2O15305 246 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 EIF3DO15371 548 aaKnown RBP eCLIP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 TGFB1I1O43294 461 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 SMAD6O43541 496 aaKnown RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 TRIM13O60858 407 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 TM7SF2O76062 418 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 KIAA0754O94854 1291 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 ENDOD1O94919 500 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 MSL3P1P0C860 447 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 TRIM49P0CI25 452 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 TRIM49CP0CI26 452 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 GAP43P17677 238 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 CD58P19256 250 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 TACR2P21452 398 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 RRM1P23921 792 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 ANP32AP39687 249 aaKnown RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 BUD31P41223 144 aaPredicted RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 UBA7P41226 1012 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 PPM1FP49593 454 aaPredicted RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 IST1P53990 364 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 UBE2HP62256 183 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 RPS18P62269 152 aaKnown RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 SNRPFP62306 86 aaKnown RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 INCA1Q0VD86 236 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 ADIGQ0VDE8 80 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 BIRC2Q13490 618 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 SQSTM1Q13501 440 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 RAPSNQ13702 412 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 ALCAMQ13740 583 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 ZNF235Q14590 738 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 NFATC4Q14934 902 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 TCEAL1Q15170 157 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 IRF4Q15306 451 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 UGT8Q16880 541 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 SGSM1Q2NKQ1 1148 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 KLHL40Q2TBA0 621 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 CT47A1Q5JQC4 288 aaPredicted RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 DCAF10Q5QP82 559 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 ANKRD40Q6AI12 368 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 DPY19L2P1Q6NXN4 242 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 DUS1LQ6P1R4 473 aaKnown RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 KRBA2Q6ZNG9 492 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 DPY19L3Q6ZPD9 716 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 APTXQ7Z2E3 356 aaKnown RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 ARHGAP22Q7Z5H3 698 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 LSRQ86X29 649 aaPredicted RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 CHSY1Q86X52 802 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 FAM186BQ8IYM0 893 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 NAGSQ8N159 534 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 ZNF808Q8N4W9 903 aaPredicted RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 KIAA0895Q8NCT3 520 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 TMEM52Q8NDY8 209 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 CHDHQ8NE62 594 aaPredicted RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 RASSF8Q8NHQ8 419 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 GPT2Q8TD30 523 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 PLEKHO2Q8TD55 490 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 CT55Q8WUE5 264 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 PATE1Q8WXA2 126 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 OR1E3Q8WZA6 343 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 TAF4BQ92750 862 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 RELTQ969Z4 430 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 STAMBPL1Q96FJ0 436 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 PAGE5Q96GU1 130 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 WDR92Q96MX6 357 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 PWWP2AQ96N64 755 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 GSDMAQ96QA5 445 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 PPP1R9BQ96SB3 815 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 SMAD5Q99717 465 aaKnown RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 DPYSL5Q9BPU6 564 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 FEM1AQ9BSK4 669 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 APOOQ9BUR5 198 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 UBXN6Q9BZV1 441 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 ILKAPQ9H0C8 392 aaPredicted RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 CXXC4Q9H2H0 198 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 KCTD10Q9H3F6 313 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 ACTL8Q9H568 366 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 LRRC4Q9HBW1 653 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 TNFRSF12AQ9NP84 129 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 METTL5Q9NRN9 209 aaKnown RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 SPATS2LQ9NUQ6 558 aaKnown RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 DMAC2Q9NW81 257 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 GPR83Q9NYM4 423 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 PRR13Q9NZ81 148 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 PDP2Q9P2J9 529 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 VPS28Q9UK41 221 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 G3BP2Q9UN86 482 aaKnown RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 TRAF3IP3Q9Y228 551 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 HS3ST2Q9Y278 367 aa3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 SF3B6Q9Y3B4 125 aaKnown RBP3.18□□□□□ -1.9
SNORA48.5-201ENST00000391143 OR1A2Q9Y585 309 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms