RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 FAM72DQ6L9T8 149 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 CCDC70Q6NSX1 233 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 ZNF852Q6ZMS4 543 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 CFAP77Q6ZQR2 320 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 PLEKHM3Q6ZWE6 761 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 PXKQ7Z7A4 578 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 FAM72BQ86X60 149 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 CNTROBQ8N137 903 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 SLC24A4Q8NFF2 622 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 OR1J2Q8NGS2 313 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 TMEM255BQ8WV15 326 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 DACH2Q96NX9 599 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 WDFY2Q96P53 400 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 DUX3Q96PT4 197 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 OR2A14Q96R47 310 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 GFI1Q99684 422 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 TCP11L1Q9NUJ3 509 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 EHD2Q9NZN4 543 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 COPG2Q9UBF2 871 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 LIMA1Q9UHB6 759 aaKnown RBP2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 PIAS3Q9Y6X2 628 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 PCNX3Q9H6A9 2034 aa2.2□□□□□ -2.06
RNU6-541P-201ENST00000384709 TP53BP1Q12888 1972 aaPredicted RBP2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 IGLV5-45A0A087WSX0 123 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 FAM237BA0A1B0GVD1 139 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 C1orf226A1L170 272 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 CDRT15L2A8MXV6 281 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 ANKRD66B4E2M5 251 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 NTN3O00634 580 aaPredicted RBP2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 HS3ST1O14792 307 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 CAPN9O14815 690 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 ATP2A1O14983 1001 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 GRID2O43424 1007 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 HIST1H2ABP04908 130 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 SPARCP09486 303 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 CFC1BP0CG36 223 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 CFC1P0CG37 223 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 CETPP11597 493 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 ACTN1P12814 892 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 POLR2CP19387 275 aaPredicted RBP2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 HIST1H2ADP20671 130 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 MAN1A1P33908 653 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 KRT9P35527 623 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 GNL1P36915 607 aaPredicted RBP2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 NR2C2P49116 596 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 FMO5P49326 533 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 CTSCP53634 463 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 TERF1P54274 439 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 GAGE2BQ13066 116 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 DMP1Q13316 513 aaPredicted RBP2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 MVPQ14764 893 aaKnown RBP2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 PNLIPRP3Q17RR3 467 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 MRGPRG-AS1Q2M3A8 158 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 GAGE2EQ4V326 116 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 TMEM35AQ53FP2 167 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 LRIF1Q5T3J3 769 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 STXBP5Q5T5C0 1151 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 SNX30Q5VWJ9 437 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 ARHGAP17Q68EM7 881 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 GAGE2AQ6NT46 116 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 ADAM5Q6NVV9 412 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 TTI2Q6NXR4 508 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 ZNF449Q6P9G9 518 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 TPRG1Q6ZUI0 275 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 HIST3H2AQ7L7L0 130 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 TRMT1LQ7Z2T5 733 aaKnown RBP2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 SLC9B2Q86UD5 537 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 GPR180Q86V85 440 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 CCDC13Q8IYE1 715 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 PM20D2Q8IYS1 436 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 FRMD1Q8N878 549 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 OR13A1Q8NGR1 328 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 HM13Q8TCT9 377 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 ALG14Q96F25 216 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 PGAM5Q96HS1 289 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 ABHD8Q96I13 439 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 MPP4Q96JB8 637 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 SLC22A12Q96S37 553 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 EPB41L5Q9HCM4 733 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 C2orf42Q9NWW7 574 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 KLHL9Q9P2J3 617 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 GAGE2DQ9UEU5 116 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 STK39Q9UEW8 545 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 GAB2Q9UQC2 676 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 MTMR6Q9Y217 621 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 KLHL20Q9Y2M5 609 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 AGRNO00468 2067 aa2.19□□□□□ -2.06
RNU6-541P-201ENST00000384709 SNED1Q8TER0 1413 aa2.18□□□□□ -2.06
RNU6-541P-201ENST00000384709 A0A0G2JNG1 304 aa2.18□□□□□ -2.06
RNU6-541P-201ENST00000384709 A0A1W2PPI3 338 aa2.18□□□□□ -2.06
RNU6-541P-201ENST00000384709 FRMD3A2A2Y4 597 aa2.18□□□□□ -2.06
RNU6-541P-201ENST00000384709 TMEM8BA6NDV4 472 aa2.18□□□□□ -2.06
RNU6-541P-201ENST00000384709 SNAP23O00161 211 aa2.18□□□□□ -2.06
RNU6-541P-201ENST00000384709 EIF3DO15371 548 aaKnown RBP eCLIP2.18□□□□□ -2.06
RNU6-541P-201ENST00000384709 CTSVO60911 334 aa2.18□□□□□ -2.06
RNU6-541P-201ENST00000384709 SLC22A3O75751 556 aa2.18□□□□□ -2.06
RNU6-541P-201ENST00000384709 BAG4O95429 457 aaKnown RBP2.18□□□□□ -2.06
RNU6-541P-201ENST00000384709 AMBPP02760 352 aa2.18□□□□□ -2.06
RNU6-541P-201ENST00000384709 ATP1A1P05023 1023 aaKnown RBP2.18□□□□□ -2.06
RNU6-541P-201ENST00000384709 FGF5P12034 268 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms