RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 GALNT6Q8NCL4 622 aa15.78■□□□□ 0.12
VCX3A-201ENST00000381089 PLEKHG4BQ96PX9 1271 aa15.78■□□□□ 0.12
VCX3A-201ENST00000381089 OR6C1Q96RD1 312 aa15.78■□□□□ 0.12
VCX3A-201ENST00000381089 ZSCAN5AQ9BUG6 496 aa15.78■□□□□ 0.12
VCX3A-201ENST00000381089 SPATA16Q9BXB7 569 aa15.78■□□□□ 0.12
VCX3A-201ENST00000381089 ZNF768Q9H5H4 540 aaKnown RBP15.78■□□□□ 0.12
VCX3A-201ENST00000381089 RTN4Q9NQC3 1192 aaKnown RBP15.78■□□□□ 0.12
VCX3A-201ENST00000381089 RAD18Q9NS91 495 aa15.78■□□□□ 0.12
VCX3A-201ENST00000381089 ATXN10Q9UBB4 475 aa15.78■□□□□ 0.12
VCX3A-201ENST00000381089 USP9YO00507 2555 aaPredicted RBP15.77■□□□□ 0.12
VCX3A-201ENST00000381089 PDZK1P1A8MUH7 402 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 ANKRD66B4E2M5 251 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 MYO1FO00160 1098 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 MTSS1O43312 755 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 VPS4BO75351 444 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 KIAA0754O94854 1291 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 SLC25A14O95258 325 aaPredicted RBP15.77■□□□□ 0.12
VCX3A-201ENST00000381089 PRLP01236 227 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 TYRP1P17643 537 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 CASP14P31944 242 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 SEPHS1P49903 392 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 MMRN1Q13201 1228 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 PAFAH1B3Q15102 231 aaKnown RBP15.77■□□□□ 0.12
VCX3A-201ENST00000381089 C4orf17Q53FE4 359 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 TDRD12Q587J7 1177 aaKnown RBP15.77■□□□□ 0.12
VCX3A-201ENST00000381089 MAP7D3Q8IWC1 876 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 RBM12BQ8IXT5 1001 aaKnown RBP15.77■□□□□ 0.12
VCX3A-201ENST00000381089 EFCAB3Q8N7B9 438 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 SEC14L1Q92503 715 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 ZDHHC12Q96GR4 267 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 ZNF830Q96NB3 372 aaPredicted RBP15.77■□□□□ 0.12
VCX3A-201ENST00000381089 TSGA13Q96PP4 275 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 PSMG3-AS1Q96PY0 264 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 WDR24Q96S15 920 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 TWSG1Q9GZX9 223 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 OR2AG1Q9H205 316 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 HSD3B7Q9H2F3 369 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 TSPY26PQ9H489 355 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 TRIM39Q9HCM9 518 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 POT1Q9NUX5 634 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 LNPEPQ9UIQ6 1025 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 VPS4AQ9UN37 437 aa15.77■□□□□ 0.12
VCX3A-201ENST00000381089 PIPSLA2A3N6 862 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 BLACEA4D250 179 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 CDC14CA4D256 554 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 KMOO15229 486 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 RECKO95980 971 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 HLA-DQB2P05538 268 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 ZNF28P17035 718 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 ZNF8P17098 575 aaPredicted RBP15.76■□□□□ 0.11
VCX3A-201ENST00000381089 F8A1P23610 371 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 IL4RP24394 825 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 PMS2P54278 862 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 QPCTQ16769 361 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 NCBP2-AS2Q69YL0 99 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 PDPK2PQ6A1A2 396 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 CRTC3Q6UUV7 619 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 PRSS42Q7Z5A4 293 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 PPP1R3BQ86XI6 285 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 KCTD6Q8NC69 237 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 ARRDC2Q8TBH0 407 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 FAM71BQ8TC56 605 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 ZNF670Q9BS34 389 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 NUP85Q9BW27 656 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 ZFYVE1Q9HBF4 777 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 CBX8Q9HC52 389 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 PDE7BQ9NP56 450 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 PADI1Q9ULC6 663 aa15.76■□□□□ 0.11
VCX3A-201ENST00000381089 BZW2Q9Y6E2 419 aaKnown RBP15.76■□□□□ 0.11
VCX3A-201ENST00000381089 C21orf140B9A014 251 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 CREG1O75629 220 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 KRT7P08729 469 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 CD48P09326 243 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 FGF5P12034 268 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 SKILP12757 684 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 VCLP18206 1134 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 NR1D1P20393 614 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 GJC1P36383 396 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 CD86P42081 329 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 CAPZBP47756 277 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 MLLT10P55197 1068 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 SH3BP2P78314 561 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 NIPAL4Q0D2K0 466 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 DPYSL3Q14195 570 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 PDK2Q15119 407 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.75■□□□□ 0.11
VCX3A-201ENST00000381089 CACHD1Q5VU97 1274 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 ALS2CLQ60I27 953 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 E4F1Q66K89 784 aaPredicted RBP15.75■□□□□ 0.11
VCX3A-201ENST00000381089 LRRTM4Q86VH4 590 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 CCNYQ8ND76 341 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 CXorf40BQ96DE9 158 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 ELMO2Q96JJ3 720 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 BTBD6Q96KE9 485 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 TIMM29Q9BSF4 260 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 THAP2Q9H0W7 228 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 OGFRQ9NZT2 677 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 PCDHGA6Q9Y5G7 932 aa15.75■□□□□ 0.11
VCX3A-201ENST00000381089 SPTBN1Q01082 2364 aaKnown RBP15.74■□□□□ 0.11
VCX3A-201ENST00000381089 GOLGA6L3A6NEY3 463 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms