RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 OSBPL9Q96SU4 736 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 ZSCAN5AQ9BUG6 496 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 AP1M1Q9BXS5 423 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 CLPBQ9H078 707 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 CDH19Q9H159 772 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 LRRC40Q9H9A6 602 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 ETNK1Q9HBU6 452 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 ARFGAP3Q9NP61 516 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 RAB6BQ9NRW1 208 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 HOMER3Q9NSC5 361 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 PIH1D1Q9NWS0 290 aaKnown RBP9.16□□□□□ -0.94
HMGN1-202ENST00000380747 TOR4AQ9NXH8 423 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 SMARCAL1Q9NZC9 954 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 SIRPGQ9P1W8 387 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 GULP1Q9UBP9 304 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 CNOT6Q9ULM6 557 aaKnown RBP9.16□□□□□ -0.94
HMGN1-202ENST00000380747 SUFUQ9UMX1 484 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 SNX12Q9UMY4 172 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 DRG1Q9Y295 367 aaKnown RBP9.16□□□□□ -0.94
HMGN1-202ENST00000380747 ZKSCAN5Q9Y2L8 839 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 PKP3Q9Y446 797 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.16□□□□□ -0.946e-9■■■■■ 32.8
HMGN1-202ENST00000380747 KNL1Q8NG31 2342 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 KNTC1P50748 2209 aa9.16□□□□□ -0.94
HMGN1-202ENST00000380747 GOLGA4Q13439 2230 aaKnown RBP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 CABIN1Q9Y6J0 2220 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 CPED1A4D0V7 1026 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 PGRMC1O00264 195 aaKnown RBP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 TPP1O14773 563 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 RFPL3O75679 317 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 SLC25A14O95258 325 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 CRTAMO95727 393 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 AP2A1O95782 977 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 FUCA1P04066 466 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 IVLP07476 585 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 RPL22P35268 128 aaKnown RBP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 SPAM1P38567 509 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 ACADVLP49748 655 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 DUSP3P51452 185 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 SEPT6Q14141 434 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 PTPRCAPQ14761 206 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 NR0B2Q15466 257 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 TAF1AQ15573 450 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 ZNF648Q5T619 568 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 ZDHHC20Q5W0Z9 365 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 KCTD11Q693B1 232 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 DENND5AQ6IQ26 1287 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 DHRS13Q6UX07 377 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 FAM151BQ6UXP7 276 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 PPP1R21Q6ZMI0 780 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 GALNT13Q8IUC8 556 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 PHYKPLQ8IUZ5 450 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 ANKMY2Q8IV38 441 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 KLHDC8BQ8IXV7 354 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 GALNT15Q8N3T1 639 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 FAM181AQ8N9Y4 354 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 GLIS1Q8NBF1 620 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 LSM14AQ8ND56 463 aaKnown RBP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 CCL4L1Q8NHW4 92 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 GDAP1Q8TB36 358 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 COG1Q8WTW3 980 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 GLYATL1Q969I3 302 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 COX14Q96I36 57 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 PLEKHG4BQ96PX9 1271 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 OR2M4Q96R27 311 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 UBL7Q96S82 380 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 NAP1L3Q99457 506 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 TMEM168Q9H0V1 697 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 ARNT2Q9HBZ2 717 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 IL26Q9NPH9 171 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 IL17CQ9P0M4 197 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 PAK5Q9P286 719 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 NFKBIL1Q9UBC1 381 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 ZNHIT2Q9UHR6 403 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 FEZ2Q9UHY8 353 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 GPR34Q9UPC5 381 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 SLC17A4Q9Y2C5 497 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 PRKAB1Q9Y478 270 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 KCTD3Q9Y597 815 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 PCDHGA11Q9Y5H2 935 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 ARL5AQ9Y689 179 aa9.15□□□□□ -0.94
HMGN1-202ENST00000380747 OAS3Q9Y6K5 1087 aaKnown RBP9.15□□□□□ -0.94
HMGN1-202ENST00000380747 PTPRQQ9UMZ3 2332 aa9.15□□□□□ -0.95
HMGN1-202ENST00000380747 GLYATL1P3A0A0U1RQE8 302 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 ERI2A8K979 691 aaKnown RBP9.14□□□□□ -0.95
HMGN1-202ENST00000380747 ZNF185O15231 689 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 MTX2O75431 263 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 GAS8O95995 478 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 CKMT1AP12532 417 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 TCP1P17987 556 aaKnown RBP9.14□□□□□ -0.95
HMGN1-202ENST00000380747 LPOP22079 712 aaPredicted RBP9.14□□□□□ -0.95
HMGN1-202ENST00000380747 ACP1P24666 158 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 ADCY8P40145 1251 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 VPS41P49754 854 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 TERF1P54274 439 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 BASP1P80723 227 aaKnown RBP9.14□□□□□ -0.95
HMGN1-202ENST00000380747 TMPRSS15P98073 1019 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 CTBSQ01459 385 aa9.14□□□□□ -0.95
HMGN1-202ENST00000380747 DHX9Q08211 1270 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms