RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 APLP1P51693 650 aa13.21□□□□□ -0.3
HIPK3-202ENST00000379016 HNRNPKP61978 463 aaKnown RBP eCLIP13.21□□□□□ -0.36e-8■■■□□ 15.3
HIPK3-202ENST00000379016 VPS26BQ4G0F5 336 aa13.21□□□□□ -0.3
HIPK3-202ENST00000379016 ZNF720Q7Z2F6 126 aa13.21□□□□□ -0.3
HIPK3-202ENST00000379016 OR14C36Q8NHC7 312 aa13.21□□□□□ -0.3
HIPK3-202ENST00000379016 PLEKHA3Q9HB20 300 aa13.21□□□□□ -0.3
HIPK3-202ENST00000379016 FANCFQ9NPI8 374 aa13.21□□□□□ -0.3
HIPK3-202ENST00000379016 ZNF175Q9Y473 711 aa13.21□□□□□ -0.3
HIPK3-202ENST00000379016 MYH11P35749 1972 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 A0A0G2JMP0 313 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 DUSP4Q13115 394 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 IKBKEQ14164 716 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 TTMPQ5BVD1 217 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 ANXA8L1Q5VT79 327 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 C9orf131Q5VYM1 1079 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 DNAJB7Q7Z6W7 309 aaPredicted RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 TMED4Q7Z7H5 227 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 OR4M2Q8NGB6 313 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 MFSD8Q8NHS3 518 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 TBC1D16Q8TBP0 767 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 SERPINB11Q96P15 392 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 FDXACB1Q9BRP7 624 aaPredicted RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 TM9SF3Q9HD45 589 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 TBCCD1Q9NVR7 557 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 RENP00797 406 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 IL1AP01583 271 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 CYP11B2P19099 503 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 VARSP26640 1264 aaKnown RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 ATP5C1P36542 298 aaKnown RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 NDST1P52848 882 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 SEMA5AQ13591 1074 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 BLMHQ13867 455 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 HECTD2Q5U5R9 776 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 NET1Q7Z628 596 aaPredicted RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 ANKRD13AQ8IZ07 590 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 POGLUT1Q8NBL1 392 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 HTR3CQ8WXA8 447 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 OR8D1Q8WZ84 308 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 HDAC2Q92769 488 aaKnown RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 LRRC46Q96FV0 321 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 ANKRD27Q96NW4 1050 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 SLC39A8Q9C0K1 460 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 MARCH2Q9P0N8 246 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 BAZ2BQ9UIF8 2168 aaKnown RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 IQCF5A8MTL0 148 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 HCKP08631 526 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 RBM34P42696 430 aaKnown RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 FAM153CQ494X1 144 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 DEFB132Q7Z7B7 95 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 REV1Q9UBZ9 1251 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 PCDHGA10Q9Y5H3 936 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 COLEC10Q9Y6Z7 277 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 ZMYM4Q5VZL5 1548 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 NEDD8-MDP1E9PL57 170 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 MLYCDO95822 493 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 ZNF14P17017 642 aaPredicted RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 MYL6P60660 151 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 C2orf80Q0P641 193 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 RUNX2Q13950 521 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 ODF4Q2M2E3 257 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 PLEKHG6Q3KR16 790 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 SHC4Q6S5L8 630 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 C16orf86Q6ZW13 317 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 METTL3Q86U44 580 aaKnown RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 RAVER1Q8IY67 606 aaKnown RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 CRYBG2Q8N1P7 616 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.2□□□□□ -0.31e-7■■□□□ 14.2
HIPK3-202ENST00000379016 AASSQ9UDR5 926 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 NAALADL1Q9UQQ1 740 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 RAPGEF6Q8TEU7 1601 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 TLL1O43897 1013 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 CD47Q08722 323 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 SMARCB1Q12824 385 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 ELAVL2Q12926 359 aaKnown RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 CHST13Q8NET6 341 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 RBM18Q96H35 190 aaKnown RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 DCLK3Q9C098 648 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 TSPAN16Q9UKR8 245 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 PCDHGC5Q9Y5F6 944 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 PTPRKQ15262 1439 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 A8MU76 341 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 GSG1L2A8MUP6 293 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 SGCEO43556 437 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 TM7SF2O76062 418 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 NR4A1P22736 598 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 YAP1P46937 504 aaKnown RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 PLPP4Q5VZY2 271 aa13.2□□□□□ -0.3
HIPK3-202ENST00000379016 LEF1Q9UJU2 399 aaPredicted RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 PCYT1BQ9Y5K3 369 aaPredicted RBP13.2□□□□□ -0.3
HIPK3-202ENST00000379016 A0A1B0GV50 99 aa13.19□□□□□ -0.3
HIPK3-202ENST00000379016 H3BRB1 525 aa13.19□□□□□ -0.3
HIPK3-202ENST00000379016 PSMA1P25786 263 aaKnown RBP13.19□□□□□ -0.3
HIPK3-202ENST00000379016 MAGEA8P43361 318 aa13.19□□□□□ -0.3
HIPK3-202ENST00000379016 HERV-K104P61576 105 aa13.19□□□□□ -0.3
HIPK3-202ENST00000379016 PDIA5Q14554 519 aa13.19□□□□□ -0.3
HIPK3-202ENST00000379016 TEAD4Q15561 434 aa13.19□□□□□ -0.3
HIPK3-202ENST00000379016 ZNF484Q5JVG2 852 aa13.19□□□□□ -0.3
HIPK3-202ENST00000379016 ATPAF1Q5TC12 328 aaPredicted RBP13.19□□□□□ -0.3
HIPK3-202ENST00000379016 ZSWIM1Q9BR11 485 aa13.19□□□□□ -0.3
HIPK3-202ENST00000379016 DUSP10Q9Y6W6 482 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms