RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 CCDC110Q8TBZ0 833 aa13.68□□□□□ -0.22
PRPF18-202ENST00000378572 AENQ8WTP8 325 aaKnown RBP13.68□□□□□ -0.22
PRPF18-202ENST00000378572 LRRN4Q8WUT4 740 aa13.68□□□□□ -0.22
PRPF18-202ENST00000378572 NSMCE1Q8WV22 266 aa13.68□□□□□ -0.22
PRPF18-202ENST00000378572 TEKT5Q96M29 485 aa13.68□□□□□ -0.22
PRPF18-202ENST00000378572 CCNL2Q96S94 520 aaPredicted RBP13.68□□□□□ -0.22
PRPF18-202ENST00000378572 TMEM168Q9H0V1 697 aa13.68□□□□□ -0.22
PRPF18-202ENST00000378572 CARS2Q9HA77 564 aaKnown RBP13.68□□□□□ -0.22
PRPF18-202ENST00000378572 B4GALT6Q9UBX8 382 aa13.68□□□□□ -0.22
PRPF18-202ENST00000378572 MTRF1LQ9UGC7 380 aaKnown RBP13.68□□□□□ -0.22
PRPF18-202ENST00000378572 SHOC2Q9UQ13 582 aa13.68□□□□□ -0.22
PRPF18-202ENST00000378572 DGKBQ9Y6T7 804 aa13.68□□□□□ -0.22
PRPF18-202ENST00000378572 HELZ2Q9BYK8 2649 aaKnown RBP13.67□□□□□ -0.22
PRPF18-202ENST00000378572 PEX11BO96011 259 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 CCNB1P14635 433 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 ITGA8P53708 1063 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 PLTPP55058 493 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 AGERQ15109 404 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 PARP6Q2NL67 630 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 C14orf28Q4W4Y0 310 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 RNASEH2BQ5TBB1 312 aaKnown RBP13.67□□□□□ -0.22
PRPF18-202ENST00000378572 ITPRIPL1Q6GPH6 555 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 PPIL6Q8IXY8 311 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 FBXO25Q8TCJ0 367 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 FMO2Q99518 471 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 TSPYL1Q9H0U9 437 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 PHPT1Q9NRX4 125 aaPredicted RBP13.67□□□□□ -0.22
PRPF18-202ENST00000378572 SEPT10Q9P0V9 454 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 LRIT1Q9P2V4 623 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 ANAPC5Q9UJX4 755 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 RNF215Q9Y6U7 377 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 ZNF462Q96JM2 2506 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.67□□□□□ -0.22
PRPF18-202ENST00000378572 A0A1W2PQM1 296 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 K7ENP7 123 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 GLB1P16278 677 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 MAPK10P53779 464 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 ZBTB17Q13105 803 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 SEMA5AQ13591 1074 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 KCTD19Q17RG1 926 aaPredicted RBP13.67□□□□□ -0.22
PRPF18-202ENST00000378572 AMZ1Q400G9 498 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 CERCAMQ5T4B2 595 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 INO80CQ6PI98 192 aaPredicted RBP13.67□□□□□ -0.22
PRPF18-202ENST00000378572 KLHDC8BQ8IXV7 354 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 TEX26Q8N6G2 289 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 NAT8LQ8N9F0 302 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 GPR156Q8NFN8 814 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 CPT1BQ92523 772 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 CAVIN3Q969G5 261 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 ECHDC3Q96DC8 303 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 WBP1Q96G27 269 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 PPP1R2P1Q96PQ5 205 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 PHACTR1Q9C0D0 580 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 RAB6BQ9NRW1 208 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 AKAP7Q9P0M2 348 aaPredicted RBP13.67□□□□□ -0.22
PRPF18-202ENST00000378572 KLHL8Q9P2G9 620 aaPredicted RBP13.67□□□□□ -0.22
PRPF18-202ENST00000378572 PCDHGC4Q9Y5F7 938 aa13.67□□□□□ -0.22
PRPF18-202ENST00000378572 PRSS38A1L453 326 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 RHPN2P1A8MT19 583 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 J3QKU1 62 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 JCHAINP01591 159 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 CYP2A6P11509 494 aaPredicted RBP13.66□□□□□ -0.22
PRPF18-202ENST00000378572 ITIH1P19827 911 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 TPSB2P20231 275 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 CCKBRP32239 447 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 VIPR1P32241 457 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 GNPDA1P46926 289 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 SKOR1P84550 965 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 NSUN2Q08J23 767 aaKnown RBP eCLIP13.66□□□□□ -0.22
PRPF18-202ENST00000378572 SLC10A7Q0GE19 358 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 ILF3Q12906 894 aaKnown RBP eCLIP13.66□□□□□ -0.22
PRPF18-202ENST00000378572 CBLBQ13191 982 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 KCNJ11Q14654 390 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 TPSAB1Q15661 275 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 BEND6Q5SZJ8 279 aaPredicted RBP13.66□□□□□ -0.22
PRPF18-202ENST00000378572 RAET1GQ6H3X3 334 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 PNCKQ6P2M8 343 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 DOK6Q6PKX4 331 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 CEP128Q6ZU80 1094 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 USP53Q70EK8 1073 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 PID1Q7Z2X4 250 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 SPRED1Q7Z699 444 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 HEATR4Q86WZ0 1026 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 SFTPA2Q8IWL1 248 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 GSPT2Q8IYD1 628 aaKnown RBP13.66□□□□□ -0.22
PRPF18-202ENST00000378572 CCL4L1Q8NHW4 92 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 PSKH2Q96QS6 385 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 ARHGAP9Q9BRR9 750 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 LGR4Q9BXB1 951 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 GSDMCQ9BYG8 508 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 FRMD8Q9BZ67 464 aaPredicted RBP13.66□□□□□ -0.22
PRPF18-202ENST00000378572 SEMA4CQ9C0C4 833 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 GBA3Q9H227 469 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 ETNK1Q9HBU6 452 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 ARFGAP3Q9NP61 516 aa13.66□□□□□ -0.22
PRPF18-202ENST00000378572 TNFRSF10CO14798 259 aa13.65□□□□□ -0.22
PRPF18-202ENST00000378572 METTL18O95568 372 aa13.65□□□□□ -0.22
PRPF18-202ENST00000378572 MYCLP1P12525 358 aaPredicted RBP13.65□□□□□ -0.22
PRPF18-202ENST00000378572 MAZP56270 477 aaKnown RBP13.65□□□□□ -0.22
PRPF18-202ENST00000378572 BASP1P80723 227 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms