RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 FASTKD3Q14CZ7 662 aaKnown RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 ECM1Q16610 540 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 DUSP6Q16828 381 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 SPATC1Q76KD6 591 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 LGI2Q8N0V4 545 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 NAT16Q8N8M0 369 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 OR7G3Q8NG95 312 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 C19orf60Q96EN9 201 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 ERMAPQ96PL5 475 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 DPCDQ9BVM2 203 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 PAK1IP1Q9NWT1 392 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 LRFN2Q9ULH4 789 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 MAGED2Q9UNF1 606 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 CYB561D2O14569 222 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 XYLBO75191 536 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 FADS2O95864 444 aaKnown RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 ZSCAN5DPP0CG00 497 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 RPL10P27635 214 aaKnown RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 RNF4P78317 190 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 SMTNL2Q2TAL5 461 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 PTPN20Q4JDL3 420 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 HECTD3Q5T447 861 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 LYSMD2Q8IV50 215 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 UBE2J2Q8N2K1 259 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 RNF149Q8NC42 400 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 GOT1L1Q8NHS2 421 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 ACER1Q8TDN7 264 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 TMEM80Q96HE8 168 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 TM9SF3Q9HD45 589 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 DDX4Q9NQI0 724 aaKnown RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 AAASQ9NRG9 546 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 MED11Q9P086 117 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 KANSL3Q9P2N6 904 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 VTI1BQ9UEU0 232 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 DERAQ9Y315 318 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 PIPSLA2A3N6 862 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 DDTLA6NHG4 134 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 RBP1P09455 135 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 MTHFD1P11586 935 aaKnown RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 CD36P16671 472 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 XPAP23025 273 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 MEOX2P50222 304 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 CSTF1Q05048 431 aaKnown RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 FBXO43Q4G163 708 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 STEAP3Q658P3 488 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 LYPD8Q6UX82 237 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 RAB44Q7Z6P3 723 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 ADGRD2Q7Z7M1 963 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 LRRTM3Q86VH5 581 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 CNTD1Q8N815 330 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 MCUQ8NE86 351 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 POF1BQ8WVV4 589 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF518BQ9C0D4 1074 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 PCDHAC1Q9H158 963 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 UNC93B1Q9H1C4 597 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF334Q9HCZ1 680 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-202ENST00000378161 KCNQ5Q9NR82 932 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 MCUBQ9NWR8 336 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 TMX2Q9Y320 296 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 MYH6P13533 1939 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 C7orf72A4D263 438 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 MEIS2O14770 477 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 SLC22A5O76082 557 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 SERPINA1P01009 418 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 PIK3CGP48736 1102 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 HNMTP50135 292 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 STAT5BP51692 787 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 VEPH1Q14D04 833 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 GNASQ5JWF2 1037 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 C3orf33Q6P1S2 294 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 SPOCD1Q6ZMY3 1216 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 TMPRSS9Q7Z410 1059 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 OR13F1Q8NGS4 319 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 BLOC1S5Q8TDH9 187 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 SLC9A7Q96T83 725 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 HDHD2Q9H0R4 259 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 C14orf119Q9NWQ9 140 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 OAZ3Q9UMX2 235 aa11.7□□□□□ -0.54
NPHP4-202ENST00000378161 LMO7Q8WWI1 1683 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 M0QZ92 97 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 ERN1O75460 977 aaKnown RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 HARS2P49590 506 aaKnown RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 ZNF81P51508 661 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 PPP3CAQ08209 521 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 PRKAA1Q13131 559 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 FGFBP1Q14512 234 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 GTF2IRD2BQ6EKJ0 949 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 PM20D1Q6GTS8 502 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 BBS12Q6ZW61 710 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 GTF2IRD2Q86UP8 949 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 ABRAQ8N0Z2 381 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 TFB1MQ8WVM0 346 aaKnown RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 TFAP2CQ92754 450 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 NSMCE2Q96MF7 247 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 PCDHGB4Q9UN71 923 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 DIMT1Q9UNQ2 313 aaKnown RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 FARP1Q9Y4F1 1045 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-202ENST00000378161 AFG3L2Q9Y4W6 797 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 PCDHGB5Q9Y5G0 923 aa11.69□□□□□ -0.54
NPHP4-202ENST00000378161 LRRC37A3O60309 1634 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms