RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 PSMG2Q969U7 264 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 TBATAQ96M53 351 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 CSF3RQ99062 836 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 TRMOQ9BU70 441 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 TRIM8Q9BZR9 551 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 RGS18Q9NS28 235 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 UXTQ9UBK9 157 aaPredicted RBP16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 DNAJC15Q9Y5T4 150 aa16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 COL4A4P53420 1690 aaPredicted RBP16.5■□□□□ 0.23
PCDHA1-201ENST00000378133 MROH6A6NGR9 719 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 JUNBP17275 347 aaPredicted RBP16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 SLC6A2P23975 617 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 SOX11P35716 441 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 OXA1LQ15070 435 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 ALFQ53S48 1182 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 SIRPB2Q5JXA9 342 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 BROXQ5VW32 411 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 GDF6Q6KF10 455 aaPredicted RBP16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 FRA10AC1Q70Z53 315 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 CLYBLQ8N0X4 340 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 L3HYPDHQ96EM0 354 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 CCDC138Q96M89 665 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 MUS81Q96NY9 551 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 ZNF347Q96SE7 839 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 LHPPQ9H008 270 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 MFSD1Q9H3U5 465 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 DSEQ9UL01 958 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 MGEA5O60502 916 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 SYNCRIPO60506 623 aaKnown RBP16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 GJB3O75712 270 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 PAPSS2O95340 614 aaPredicted RBP16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 WISP3O95389 354 aaPredicted RBP16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 ALBP02768 609 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 CAPN3P20807 821 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 EEF1DP29692 281 aaKnown RBP16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 OPRL1P41146 370 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 FOXA1P55317 472 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 HERVK_113P63132 956 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 TUBA3CQ13748 450 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 BCL2A1Q16548 175 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 CLIP3Q96DZ5 547 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 ALPK1Q96QP1 1244 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 BEGAINQ9BUH8 593 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 ERVK-6Q9BXR3 956 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 SP110Q9HB58 689 aa16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 INTS10Q9NVR2 710 aaKnown RBP16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 ZFC3H1O60293 1989 aaKnown RBP16.49■□□□□ 0.23
PCDHA1-201ENST00000378133 M0QZQ0 153 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 KDM1AO60341 852 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 MT-ND1P03886 318 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 CHRM3P20309 590 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 MAPRE1Q15691 268 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 ZIK1Q3SY52 487 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 THOC7Q6I9Y2 204 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 SLC2A7Q6PXP3 512 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 CXCL17Q6UXB2 119 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 RASAL3Q86YV0 1011 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 UMODL1-AS1Q8N2C9 162 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 PTGR2Q8N8N7 351 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 ABHD11Q8NFV4 315 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 LRRC58Q96CX6 371 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 SERPINB11Q96P15 392 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 MROQ9BYG7 248 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 ING2Q9H160 280 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 MID1IP1Q9NPA3 183 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 POLR3BQ9NW08 1133 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 FXYD1O00168 92 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 AQP9O43315 295 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 CDK14O94921 469 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 LDLRP01130 860 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 NCK1P16333 377 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 HOXD11P31277 338 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 CD52P31358 61 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 IDUAP35475 653 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 GRB7Q14451 532 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 OTUD3Q5T2D3 398 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 XAF1Q6GPH4 301 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 ZNF549Q6P9A3 640 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 TBPL2Q6SJ96 375 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 BTLAQ7Z6A9 289 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 MRPL10Q7Z7H8 261 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 SH3YL1Q96HL8 342 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 NSUN5Q96P11 429 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 ST14Q9Y5Y6 855 aa16.48■□□□□ 0.23
PCDHA1-201ENST00000378133 WASH4PA8MWX3 477 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 CLDN25C9JDP6 229 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 UBXN8O00124 270 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 EIF3FO00303 357 aaPredicted RBP16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 LDB2O43679 373 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 OXSR1O95747 527 aaPredicted RBP16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 CD1DP15813 335 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 OCA2Q04671 838 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 ZNF846Q147U1 533 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 PFKFB4Q16877 469 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 GNASQ5JWF2 1037 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 PERM1Q5SV97 790 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 TBC1D21Q8IYX1 336 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 MIER2Q8N344 545 aa16.47■□□□□ 0.23
PCDHA1-201ENST00000378133 PGBD5Q8N414 524 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms