RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 GPSM3Q9Y4H4 160 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 SNX8Q9Y5X2 465 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 POLR2AP24928 1970 aaKnown RBP14.4□□□□□ -0.1
TCOF1-202ENST00000377797 IQCF5A8MTL0 148 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 SLC28A1O00337 649 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 NRP2O60462 931 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 NPHS1O60500 1241 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 CLDN7O95471 211 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 MSX2P35548 267 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-202ENST00000377797 ADAM17P78536 824 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 TAS1R1Q7RTX1 841 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 TMEM132CQ8N3T6 1108 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 ST13P5Q8NFI4 369 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-202ENST00000377797 TEX12Q9BXU0 123 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 INVSQ9Y283 1065 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 USP3Q9Y6I4 520 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 SPACA6W5XKT8 324 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 ZNF839A8K0R7 811 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 CNPP09543 421 aaKnown RBP14.4□□□□□ -0.1
TCOF1-202ENST00000377797 FCGR1AP12314 374 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 GPR33Q49SQ1 333 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 FAM98BQ52LJ0 330 aaKnown RBP14.4□□□□□ -0.1
TCOF1-202ENST00000377797 GDPD4Q6W3E5 623 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 CILP2Q8IUL8 1156 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 GSTCDQ8NEC7 633 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 FEM1AQ9BSK4 669 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 NUDT4Q9NZJ9 180 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 C15orf41Q9Y2V0 281 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 ASLP04424 464 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 DEFB103AP81534 67 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 TGM3Q08188 693 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 DOCK1Q14185 1865 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 ARSIQ5FYB1 569 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 MTSS1LQ765P7 747 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 PHYKPLQ8IUZ5 450 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 GPR156Q8NFN8 814 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 WFIKKN2Q8TEU8 576 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 DLEC1Q9Y238 1755 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 A0A0J9YYE9 177 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 DLX3O60479 287 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 PAPSS2O95340 614 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-202ENST00000377797 AP5B1Q2VPB7 878 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 NAPRTQ6XQN6 538 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 CLDN19Q8N6F1 224 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 FBXL21Q9UKT6 434 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 SIX3O95343 332 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-202ENST00000377797 TIMP1P01033 207 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 NTRK1P04629 796 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 RHOP08100 348 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 GKP32189 559 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 GRIA3P42263 894 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 SLC7A2P52569 658 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 DSC1Q08554 894 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 TRAF2Q12933 501 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 FAM26DQ5JW98 314 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 OTUD3Q5T2D3 398 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-202ENST00000377797 TTC33Q6PID6 262 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-202ENST00000377797 CDHR3Q6ZTQ4 885 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 CELF5Q8N6W0 485 aaKnown RBP14.39□□□□□ -0.11
TCOF1-202ENST00000377797 UBE2E3Q969T4 207 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 CLPTM1LQ96KA5 538 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 CAPN10Q9HC96 672 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 CIDEBQ9UHD4 219 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 SLC22A3O75751 556 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 ALDOAP04075 364 aaKnown RBP14.39□□□□□ -0.11
TCOF1-202ENST00000377797 PSMC3P17980 439 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 MYLK3Q32MK0 819 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 ABTB1Q969K4 478 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-202ENST00000377797 CCT7Q99832 543 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 RTKNQ9BST9 563 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 TFB2MQ9H5Q4 396 aaKnown RBP14.39□□□□□ -0.11
TCOF1-202ENST00000377797 TRPC4Q9UBN4 977 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 BLOC1S6Q9UL45 172 aa14.39□□□□□ -0.11
TCOF1-202ENST00000377797 SDK1Q7Z5N4 2213 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 MAGEA13PA6NCF6 341 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 RFPL2O75678 378 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 OR4F21O95013 312 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 KCNH1O95259 989 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 FSHRP23945 695 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 NRIP1P48552 1158 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 NAE1Q13564 534 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 CHRNA6Q15825 494 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 ZNF598Q86UK7 904 aaKnown RBP14.38□□□□□ -0.11
TCOF1-202ENST00000377797 PLD6Q8N2A8 252 aaKnown RBP14.38□□□□□ -0.11
TCOF1-202ENST00000377797 DLG3Q92796 817 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 PRPF19Q9UMS4 504 aaKnown RBP14.38□□□□□ -0.11
TCOF1-202ENST00000377797 C16orf96A6NNT2 1141 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 TRIM38O00635 465 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 ADH5P11766 374 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 KRT78Q8N1N4 520 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 CCDC3Q9BQI4 270 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 DNAJC11Q9NVH1 559 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 KLF11O14901 512 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 LDLRP01130 860 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 HNF4AP41235 474 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 STC1P52823 247 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 MGAT3Q09327 533 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 NIPAL4Q0D2K0 466 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 PITRM1Q5JRX3 1037 aa14.38□□□□□ -0.11
TCOF1-202ENST00000377797 CFAP206Q8IYR0 622 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms