RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 KBTBD6Q86V97 674 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 UMODL1-AS1Q8N2C9 162 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 AENQ8WTP8 325 aaKnown RBP8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 NEUROG2Q9H2A3 272 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 CCDC167Q9P0B6 97 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 PCDHB1Q9Y5F3 818 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 MAST2Q6P0Q8 1798 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 MYO1GB0I1T2 1018 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 VIPR1P32241 457 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 KRT20P35900 424 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 PDE1CQ14123 709 aaPredicted RBP8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 ZNF234Q14588 700 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 ZNF648Q5T619 568 aaPredicted RBP8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 PHF19Q5T6S3 580 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 CAPN13Q6MZZ7 669 aaPredicted RBP8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 SPRED2Q7Z698 418 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 SYT12Q8IV01 421 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 ZNF655Q8N720 491 aaPredicted RBP8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 FIBINQ8TAL6 211 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 CLP1Q92989 425 aaKnown RBP8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 TCF7L2Q9NQB0 619 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 SPATS2LQ9NUQ6 558 aaKnown RBP8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 SOX13Q9UN79 622 aa8.4□□□□□ -1.06
CRNKL1-202ENST00000377340 NUDT14O95848 222 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 PDHA1P08559 390 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 CXCR2P25025 360 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 GRIA4P48058 902 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 TSNQ15631 228 aaKnown RBP8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 FBXO43Q4G163 708 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 SLC9A4Q6AI14 798 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 C10orf53Q8N6V4 93 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 RAD51AP1Q96B01 352 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 VMP1Q96GC9 406 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 LRCH3Q96II8 777 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 NELL2Q99435 816 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 KLF16Q9BXK1 252 aaPredicted RBP8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 ARHGEF3Q9NR81 526 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 MAFFQ9ULX9 164 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 DOCK2Q92608 1830 aa8.4□□□□□ -1.07
CRNKL1-202ENST00000377340 A0A088AWK7 358 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 A0A0G2JN53 185 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 TM9SF1O15321 606 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 LATO43561 262 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 LRATO95237 230 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 CYP17A1P05093 508 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 ZNF10P21506 573 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 MAPK1P28482 360 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 SEPHS1P49903 392 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 ACTN3Q08043 901 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 CYP51A1Q16850 503 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 FSTL4Q6MZW2 842 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 RGS9BPQ6ZS82 235 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 SNX20Q7Z614 316 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 HEATR4Q86WZ0 1026 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 LMNTD2Q8IXW0 634 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 PNPLA1Q8N8W4 532 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 RTP3Q9BQQ7 232 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 AARSD1Q9BTE6 412 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 EPN3Q9H201 632 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 EIF2B4Q9UI10 523 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 ANKRD6Q9Y2G4 727 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 MICAL3Q7RTP6 2002 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 SLC7A4O43246 635 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 STATHP02808 62 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 FYNP06241 537 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 H2AFXP16104 143 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 SLC1A2P43004 574 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 PTGER3P43115 390 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 ARCN1P48444 511 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 ATP6V0D1P61421 351 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 TFF2Q03403 129 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 CSTF1Q05048 431 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 CRTC1Q6UUV9 634 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 ZNF621Q6ZSS3 439 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 GPR149Q86SP6 731 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 KIF2BQ8N4N8 673 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 ZCCHC10Q8TBK6 192 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 ZNF473Q8WTR7 871 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 NCSTNQ92542 709 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 MARK4Q96L34 752 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 SLC2A11Q9BYW1 496 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 TRIT1Q9H3H1 467 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 POLG2Q9UHN1 485 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 FAM189A1O60320 539 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 OR10H2O60403 315 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 NOL3O60936 208 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 RNGTTO60942 597 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 STK16O75716 305 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 KLHL2O95198 593 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 KLKB1P03952 638 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 EEF1B2P24534 225 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 HNF1BP35680 557 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 SSR2P43308 183 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 NFYCQ13952 458 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 LDLRAP1Q5SW96 308 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 USP53Q70EK8 1073 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 TMEFF1Q8IYR6 380 aa8.39□□□□□ -1.07
CRNKL1-202ENST00000377340 DSELQ8IZU8 1212 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms