RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 NOBOXO60393 691 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 MAN1A2O60476 641 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 UGT2B11O75310 529 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 DEAF1O75398 565 aaPredicted RBP16.39■□□□□ 0.21
TRIM39-201ENST00000376656 TGM1P22735 817 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 IL12AP29459 219 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 SERPINH1P50454 418 aaKnown RBP16.39■□□□□ 0.21
TRIM39-201ENST00000376656 TIAL1Q01085 375 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRIM39-201ENST00000376656 SELPLGQ14242 412 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 HS3ST5Q8IZT8 346 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 TTC30BQ8N4P2 665 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 DTWD1Q8N5C7 304 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 PCED1BQ96HM7 432 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 CYP2S1Q96SQ9 504 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 MBOAT4Q96T53 435 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 AMBRA1Q9C0C7 1298 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 KLHL25Q9H0H3 589 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 TIMM13Q9Y5L4 95 aaPredicted RBP16.39■□□□□ 0.21
TRIM39-201ENST00000376656 USP2O75604 605 aaPredicted RBP16.39■□□□□ 0.21
TRIM39-201ENST00000376656 PRSS23O95084 383 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 SLC26A3P40879 764 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 KCNJ8Q15842 424 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 RAB41Q5JT25 222 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 LAIR2Q6ISS4 152 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 RBM23Q86U06 439 aaKnown RBP16.39■□□□□ 0.21
TRIM39-201ENST00000376656 CRCPO75575 148 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 SLC22A3O75751 556 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 ZBTB7AO95365 584 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 PRDX3P30048 256 aaKnown RBP16.39■□□□□ 0.21
TRIM39-201ENST00000376656 MTHFRP42898 656 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 POLR2JP52435 117 aaKnown RBP16.39■□□□□ 0.21
TRIM39-201ENST00000376656 MAXP61244 160 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 EMX2Q04743 252 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 CLCQ05315 142 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 AGAP7PQ5VUJ5 663 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 ANKRD13BQ86YJ7 626 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 APOBEC3FQ8IUX4 373 aaKnown RBP16.39■□□□□ 0.21
TRIM39-201ENST00000376656 TSPEARQ8WU66 669 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 CARS2Q9HA77 564 aaKnown RBP16.39■□□□□ 0.21
TRIM39-201ENST00000376656 EXD2Q9NVH0 621 aa16.39■□□□□ 0.21
TRIM39-201ENST00000376656 DICER1Q9UPY3 1922 aaKnown RBP16.38■□□□□ 0.21
TRIM39-201ENST00000376656 PTGES3LE9PB15 166 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 SLC25A27O95847 323 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 CD47Q08722 323 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 FAM86B1Q8N7N1 296 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 ARRDC4Q8NCT1 418 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 TRPM4Q8TD43 1214 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 PAK1IP1Q9NWT1 392 aaPredicted RBP16.38■□□□□ 0.21
TRIM39-201ENST00000376656 VPS51Q9UID3 782 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 HHLA1C9JL84 531 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 GABRDO14764 452 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 CAPN15O75808 1086 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 FDXRP22570 491 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 ALDH4A1P30038 563 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 MTPNP58546 118 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 FXNQ16595 210 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 ATOH8Q96SQ7 321 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 LRRC3Q9BY71 257 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 RBPJLQ9UBG7 517 aa16.38■□□□□ 0.21
TRIM39-201ENST00000376656 PIN4Q9Y237 131 aaKnown RBP16.38■□□□□ 0.21
TRIM39-201ENST00000376656 TNS1Q9HBL0 1735 aaKnown RBP16.38■□□□□ 0.21
TRIM39-201ENST00000376656 GPR32O75388 356 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 ENO2P09104 434 aaPredicted RBP16.37■□□□□ 0.21
TRIM39-201ENST00000376656 PRR35P0CG20 571 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 HABP4Q5JVS0 413 aaKnown RBP16.37■□□□□ 0.21
TRIM39-201ENST00000376656 SPATA19Q7Z5L4 167 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 PPTC7Q8NI37 304 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 GABPB2Q8TAK5 448 aaPredicted RBP16.37■□□□□ 0.21
TRIM39-201ENST00000376656 ITFG1Q8TB96 612 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 NUDT8Q8WV74 236 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 ISG20Q96AZ6 181 aaKnown RBP16.37■□□□□ 0.21
TRIM39-201ENST00000376656 AURKBQ96GD4 344 aaPredicted RBP16.37■□□□□ 0.21
TRIM39-201ENST00000376656 BTN2A3PQ96KV6 586 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 PPM1MQ96MI6 270 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 CCDC90BQ9GZT6 254 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 POLE4Q9NR33 117 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 SPATA7Q9P0W8 599 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 SLC7A4O43246 635 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 KCNE1P15382 129 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 LSM3P62310 102 aaKnown RBP16.37■□□□□ 0.21
TRIM39-201ENST00000376656 PPP1R8Q12972 351 aaKnown RBP16.37■□□□□ 0.21
TRIM39-201ENST00000376656 IHHQ14623 411 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 INAQ16352 499 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 PHKG1Q16816 387 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 DEPDC1Q5TB30 811 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 TTC23Q5W5X9 447 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 TAPT1Q6NXT6 567 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 ZDHHC13Q8IUH4 622 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 MFSD4AQ8N468 514 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 NDNFQ8TB73 568 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 MFSD1Q9H3U5 465 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 ARNT2Q9HBZ2 717 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 SNX5Q9Y5X3 404 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 TYW5A2RUC4 315 aaKnown RBP16.37■□□□□ 0.21
TRIM39-201ENST00000376656 G3V2T6 193 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 RAP2AP10114 183 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 BMP4P12644 408 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 PCMT1P22061 227 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 CD86P42081 329 aa16.37■□□□□ 0.21
TRIM39-201ENST00000376656 LCP2Q13094 533 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms