RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 GPAT3Q53EU6 434 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 TPGS2Q68CL5 300 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 GLYATQ6IB77 296 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 OR13C4Q8NGS5 318 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 WDR36Q8NI36 951 aaKnown RBP13.53□□□□□ -0.24
C9orf47-203ENST00000375851 NPY6RQ99463 290 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 CCSER2Q9H7U1 834 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 POLR1BQ9H9Y6 1135 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 ADGRE2Q9UHX3 823 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 MED26O95402 600 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 IFNA16P05015 189 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 APODP05090 189 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 ADSLP30566 484 aaPredicted RBP13.53□□□□□ -0.24
C9orf47-203ENST00000375851 KCNJ11Q14654 390 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 SLC9A4Q6AI14 798 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 DCAKDQ8WVC6 231 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 C16orf70Q9BSU1 422 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 WRAP53Q9BUR4 548 aaKnown RBP13.53□□□□□ -0.24
C9orf47-203ENST00000375851 CLIC5Q9NZA1 410 aa13.53□□□□□ -0.24
C9orf47-203ENST00000375851 CICQ96RK0 1608 aaPredicted RBP13.52□□□□□ -0.24
C9orf47-203ENST00000375851 GSAPA4D1B5 854 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 NEMP2A6NFY4 417 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 OR51F1A6NGY5 319 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 CAPN1P07384 714 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 ACRP10323 421 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 UROSP10746 265 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 KELP23276 732 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 COPZ1P61923 177 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 CYP4F2P78329 520 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 TOP3AQ13472 1001 aaPredicted RBP13.52□□□□□ -0.24
C9orf47-203ENST00000375851 CTU1Q7Z7A3 348 aaKnown RBP13.52□□□□□ -0.24
C9orf47-203ENST00000375851 RALGPS2Q86X27 583 aaPredicted RBP13.52□□□□□ -0.24
C9orf47-203ENST00000375851 C2orf73Q8N5S3 287 aaPredicted RBP13.52□□□□□ -0.24
C9orf47-203ENST00000375851 OR10G6Q8NH81 332 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 POP5Q969H6 163 aaKnown RBP13.52□□□□□ -0.24
C9orf47-203ENST00000375851 KLHL32Q96NJ5 620 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 EIF2B4Q9UI10 523 aaKnown RBP13.52□□□□□ -0.24
C9orf47-203ENST00000375851 ARL5AQ9Y689 179 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 ZW10O43264 779 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 SUV39H1O43463 412 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 NDUFB5O43674 189 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 PAX7P23759 505 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 GAD2Q05329 585 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 RFTN1Q14699 578 aaPredicted RBP13.52□□□□□ -0.24
C9orf47-203ENST00000375851 ZNHIT3Q15649 155 aaPredicted RBP13.52□□□□□ -0.24
C9orf47-203ENST00000375851 MTX3Q5HYI7 312 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 ATAT1Q5SQI0 421 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 BROXQ5VW32 411 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 ZNF544Q6NX49 715 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 MSANTD2Q6P1R3 559 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 MIR1-1HGQ9H1L0 117 aa13.52□□□□□ -0.24
C9orf47-203ENST00000375851 RGPD2P0DJD1 1756 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 NPHS1O60500 1241 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 NDUFS2O75306 463 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 MANFP55145 182 aaKnown RBP13.52□□□□□ -0.25
C9orf47-203ENST00000375851 PEX6Q13608 980 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 PLA2G4EQ3MJ16 856 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 PSRC1Q6PGN9 363 aaPredicted RBP13.52□□□□□ -0.25
C9orf47-203ENST00000375851 SPPL2CQ8IUH8 684 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 PHYKPLQ8IUZ5 450 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 CPA6Q8N4T0 437 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 SIDT2Q8NBJ9 832 aaKnown RBP13.52□□□□□ -0.25
C9orf47-203ENST00000375851 ABCB8Q9NUT2 735 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 DUS2Q9NX74 493 aaKnown RBP13.52□□□□□ -0.25
C9orf47-203ENST00000375851 TAS2R1Q9NYW7 299 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 CIDEBQ9UHD4 219 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 SLC9A8Q9Y2E8 581 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 YIPF1Q9Y548 306 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 CAPN8A6NHC0 703 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 FAM25AB3EWG3 89 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 FAM25CB3EWG5 89 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 FAM25GB3EWG6 89 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 RNASEH2AO75792 299 aaKnown RBP13.52□□□□□ -0.25
C9orf47-203ENST00000375851 CDH5P33151 784 aaPredicted RBP13.52□□□□□ -0.25
C9orf47-203ENST00000375851 CAP1Q01518 475 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 RGS1Q08116 209 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 DGUOKQ16854 277 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 ARMC4Q5T2S8 1044 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 CFAP206Q8IYR0 622 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 RERGQ96A58 199 aaPredicted RBP13.52□□□□□ -0.25
C9orf47-203ENST00000375851 ACDQ96AP0 544 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 CLIP3Q96DZ5 547 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 FIZ1Q96SL8 496 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 AIF1LQ9BQI0 150 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 CERS4Q9HA82 394 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 PNPLA3Q9NST1 481 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 U3KQV3 271 aa13.52□□□□□ -0.25
C9orf47-203ENST00000375851 AGRPO00253 132 aa13.51□□□□□ -0.25
C9orf47-203ENST00000375851 SERPINB7O75635 380 aa13.51□□□□□ -0.25
C9orf47-203ENST00000375851 GNRH1P01148 92 aa13.51□□□□□ -0.25
C9orf47-203ENST00000375851 PSMD8P48556 350 aa13.51□□□□□ -0.25
C9orf47-203ENST00000375851 GTF2H2Q13888 395 aa13.51□□□□□ -0.25
C9orf47-203ENST00000375851 ANGPT1Q15389 498 aa13.51□□□□□ -0.25
C9orf47-203ENST00000375851 MSS51Q4VC12 460 aa13.51□□□□□ -0.25
C9orf47-203ENST00000375851 GTF2H2CQ6P1K8 395 aa13.51□□□□□ -0.25
C9orf47-203ENST00000375851 ADCY4Q8NFM4 1077 aa13.51□□□□□ -0.25
C9orf47-203ENST00000375851 INTS10Q9NVR2 710 aaKnown RBP13.51□□□□□ -0.25
C9orf47-203ENST00000375851 IKZF3Q9UKT9 509 aa13.51□□□□□ -0.25
C9orf47-203ENST00000375851 RAB23Q9ULC3 237 aa13.51□□□□□ -0.25
C9orf47-203ENST00000375851 LYVE1Q9Y5Y7 322 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms