RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 ERLEC1Q96DZ1 483 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 CCT7Q99832 543 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 TFB2MQ9H5Q4 396 aaKnown RBP13.88□□□□□ -0.19
MSH5-202ENST00000375740 SYTL2Q9HCH5 934 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 ZNF334Q9HCZ1 680 aaPredicted RBP13.88□□□□□ -0.19
MSH5-202ENST00000375740 GALPQ9UBC7 116 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 FKBPLQ9UIM3 349 aa13.88□□□□□ -0.19
MSH5-202ENST00000375740 FNDC3AQ9Y2H6 1198 aaKnown RBP13.88□□□□□ -0.19
MSH5-202ENST00000375740 C7orf72A4D263 438 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 PPP6CO00743 305 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 EPHB3P54753 998 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 SH3BP2P78314 561 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 HTRA3P83110 453 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 ZXDBP98169 803 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 TXNDC8Q6A555 127 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 PSAPL1Q6NUJ1 521 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 GK5Q6ZS86 529 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 PIANPQ8IYJ0 282 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 ALDH16A1Q8IZ83 802 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 TSPAN14Q8NG11 270 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 RHEBL1Q8TAI7 183 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 ADAMTS19Q8TE59 1207 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 ZNF689Q96CS4 500 aaPredicted RBP13.87□□□□□ -0.19
MSH5-202ENST00000375740 ABHD8Q96I13 439 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 ATOH8Q96SQ7 321 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 TCF12Q99081 682 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 FEM1AQ9BSK4 669 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 DCUN1D5Q9BTE7 237 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 HERC2P3Q9BVR0 1158 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 CCDC68Q9H2F9 335 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 TAS2R13Q9NYV9 303 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 LHX3Q9UBR4 397 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 EBF1Q9UH73 591 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 IKZF3Q9UKT9 509 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 UBDO15205 165 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 ADAM23O75077 832 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 GPC4O75487 556 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 MC4RP32245 332 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 CDK9P50750 372 aaKnown RBP13.87□□□□□ -0.19
MSH5-202ENST00000375740 THOP1P52888 689 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 PKNOX1P55347 436 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 PTPRNQ16849 979 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 ZNF362Q5T0B9 420 aaPredicted RBP13.87□□□□□ -0.19
MSH5-202ENST00000375740 GRAMD4Q6IC98 578 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 CYHR1Q6ZMK1 362 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 ZNF783Q6ZMS7 281 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 BNC2Q6ZN30 1099 aaPredicted RBP13.87□□□□□ -0.19
MSH5-202ENST00000375740 RAB44Q7Z6P3 723 aaPredicted RBP13.87□□□□□ -0.19
MSH5-202ENST00000375740 HMGCLL1Q8TB92 370 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 BHMTQ93088 406 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 TMA16Q96EY4 203 aaKnown RBP13.87□□□□□ -0.19
MSH5-202ENST00000375740 SERPINI1Q99574 410 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 SLC2A11Q9BYW1 496 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 WDR41Q9HAD4 459 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 TBCCD1Q9NVR7 557 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 STK39Q9UEW8 545 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 VPS28Q9UK41 221 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 FCF1Q9Y324 198 aaKnown RBP13.87□□□□□ -0.19
MSH5-202ENST00000375740 ATP6AP2A0A1C7CYW4 349 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 TMEM247A6NEH6 219 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 STX16-NPEPL1H3BU86 382 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 GREM1O60565 184 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 ATP6AP2O75787 350 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 MT-CO1P00395 513 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 HALP42357 657 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 DPP6P42658 865 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 MNX1P50219 401 aaPredicted RBP13.87□□□□□ -0.19
MSH5-202ENST00000375740 UGT3A2Q3SY77 523 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 RARS2Q5T160 578 aaKnown RBP13.87□□□□□ -0.19
MSH5-202ENST00000375740 ATXN7L2Q5T6C5 722 aaPredicted RBP13.87□□□□□ -0.19
MSH5-202ENST00000375740 CLYBLQ8N0X4 340 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 PGAM4Q8N0Y7 254 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 USP13Q92995 863 aaPredicted RBP13.87□□□□□ -0.19
MSH5-202ENST00000375740 KIAA1191Q96A73 305 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 TOX2Q96NM4 488 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 BIRC8Q96P09 236 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 GPR21Q99679 349 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 SELENONQ9NZV5 590 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 OR51B4Q9Y5P0 310 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 INSL5Q9Y5Q6 135 aa13.87□□□□□ -0.19
MSH5-202ENST00000375740 STX7O15400 261 aaKnown RBP13.86□□□□□ -0.19
MSH5-202ENST00000375740 OR1I1O60431 355 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 CDK14O94921 469 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 URODP06132 367 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 HSPA1AP0DMV8 641 aaKnown RBP13.86□□□□□ -0.19
MSH5-202ENST00000375740 HSPA1BP0DMV9 641 aaKnown RBP13.86□□□□□ -0.19
MSH5-202ENST00000375740 GFAPP14136 432 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 HDCP19113 662 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 CSKP41240 450 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 RHOAP61586 193 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 DEFB103AP81534 67 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 RAD51Q06609 339 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 CD300CQ08708 224 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 ZNF423Q2M1K9 1284 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 INO80DQ53TQ3 878 aaPredicted RBP13.86□□□□□ -0.19
MSH5-202ENST00000375740 ZRANB3Q5FWF4 1079 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 PIGGQ5H8A4 983 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 TCEAL8Q8IYN2 117 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 TTC30BQ8N4P2 665 aa13.86□□□□□ -0.19
MSH5-202ENST00000375740 STAG3L4Q8TBR4 150 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms