RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 OGFOD2Q6N063 350 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 ATG14Q6ZNE5 492 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 ANKRD23Q86SG2 305 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 TXNDC5Q8NBS9 432 aaKnown RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 MYO5AQ9Y4I1 1855 aaKnown RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 PRR23D1E9PI22 279 aaPredicted RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 IRAK2O43187 625 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 RGS10O43665 173 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 CATP04040 527 aaKnown RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 PRR23D2P0DMB1 279 aaPredicted RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 HDCP19113 662 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 PAX3P23760 479 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 GSK3BP49841 420 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 TUBA4AP68366 448 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 GALNT2Q10471 571 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 TRIP4Q15650 581 aaPredicted RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 CPNE9Q8IYJ1 553 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 C12orf43Q96C57 262 aaKnown RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 PAWRQ96IZ0 340 aaKnown RBP16.69■□□□□ 0.26
VARS-215ENST00000375663 VPS35Q96QK1 796 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 LRRC3Q9BY71 257 aa16.69■□□□□ 0.26
VARS-215ENST00000375663 SNPHO15079 494 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 UGT2B11O75310 529 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 SEPHS1P49903 392 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 EPHB3P54753 998 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 PITX1P78337 314 aaPredicted RBP16.68■□□□□ 0.26
VARS-215ENST00000375663 ARHGAP1Q07960 439 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 PABPC1LQ4VXU2 614 aaKnown RBP16.68■□□□□ 0.26
VARS-215ENST00000375663 XKR5Q6UX68 686 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 LUZP2Q86TE4 346 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 DEPDC4Q8N2C3 294 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 BRSK1Q8TDC3 778 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 PPP1R14BQ96C90 147 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 KIFC1Q9BW19 673 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 NUSAP1Q9BXS6 441 aaKnown RBP16.68■□□□□ 0.26
VARS-215ENST00000375663 NFKBIZQ9BYH8 718 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 CACNG4Q9UBN1 327 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 CCDC162PA2VCL2 907 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 GABRDO14764 452 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 RAP2AP10114 183 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 PPP2R1BP30154 601 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 ANXA11P50995 505 aaKnown RBP16.68■□□□□ 0.26
VARS-215ENST00000375663 PGGT1BP53609 377 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 ARFGAP1Q8N6T3 406 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 APOLD1Q96LR9 279 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 ACTR3BQ9P1U1 418 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 TLL2Q9Y6L7 1015 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 TBKBP1A7MCY6 615 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 CLIC3O95833 236 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 ALDH4A1P30038 563 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 DAG1Q14118 895 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 MYLK3Q32MK0 819 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 CEP78Q5JTW2 689 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 OR52E8Q6IFG1 317 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 PAQR3Q6TCH7 311 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 P2RY8Q86VZ1 359 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 ARRDC4Q8NCT1 418 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 RBPJLQ9UBG7 517 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 SDK1Q7Z5N4 2213 aa16.68■□□□□ 0.26
VARS-215ENST00000375663 A0A1W2PPW3 197 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 KLHL33A6NCF5 533 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 SDHDO14521 159 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 SMPD1P17405 629 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 HOXB6P17509 224 aaKnown RBP16.67■□□□□ 0.26
VARS-215ENST00000375663 ENTPD1P49961 510 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 DET1Q7L5Y6 550 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 CIR1Q86X95 450 aaPredicted RBP16.67■□□□□ 0.26
VARS-215ENST00000375663 KCTD13Q8WZ19 329 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 HAPLN3Q96S86 360 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 CIPCQ9C0C6 399 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 HIPK3Q9H422 1215 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 PDP1Q9P0J1 537 aaPredicted RBP16.67■□□□□ 0.26
VARS-215ENST00000375663 CRNNQ9UBG3 495 aaPredicted RBP16.67■□□□□ 0.26
VARS-215ENST00000375663 PCDHGC4Q9Y5F7 938 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 NOBOXO60393 691 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 MYL12AP19105 171 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 AQP1P29972 269 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 NDST2P52849 883 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 GNA12Q03113 381 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 CARTPTQ16568 116 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 OGFRL1Q5TC84 451 aaPredicted RBP16.67■□□□□ 0.26
VARS-215ENST00000375663 FAM91A1Q658Y4 838 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 STEAP4Q687X5 459 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 DRAXINQ8NBI3 349 aaPredicted RBP16.67■□□□□ 0.26
VARS-215ENST00000375663 RTP4Q96DX8 246 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 INTS10Q9NVR2 710 aaKnown RBP16.67■□□□□ 0.26
VARS-215ENST00000375663 RAI2Q9Y5P3 530 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 UBR2Q8IWV8 1755 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 CAPN14A8MX76 684 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 TSC22D2O75157 780 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 SCELO95171 688 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 KIR3DL1P43629 444 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 RAB15P59190 212 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 ERVK-8P63133 956 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 PLD1Q13393 1074 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 CHSY3Q70JA7 882 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 TRMT11Q7Z4G4 463 aaKnown RBP16.67■□□□□ 0.26
VARS-215ENST00000375663 CTU1Q7Z7A3 348 aaKnown RBP16.67■□□□□ 0.26
VARS-215ENST00000375663 OR13C4Q8NGS5 318 aa16.67■□□□□ 0.26
VARS-215ENST00000375663 ZFP28Q8NHY6 868 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms