RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 BRD9Q9H8M2 597 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 PREBQ9HCU5 417 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 EURLQ9NYK6 297 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 SPG21Q9NZD8 308 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 SIRPGQ9P1W8 387 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 ECI2O75521 394 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 BEST1O76090 585 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 AHSGP02765 367 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 IL7RP16871 459 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 UGT1A1P22309 533 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 UGT1A4P22310 534 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 UGT1A3P35503 534 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 UGT1A5P35504 534 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 BLVRAP53004 296 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 BNIP3Q12983 259 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 CEP97Q8IW35 865 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 FLCNQ8NFG4 579 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 OR7D4Q8NG98 312 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 TMEM159Q96B96 161 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 RBM4BQ9BQ04 359 aaKnown RBP6.5□□□□□ -1.37
SMC1A-202ENST00000375340 FEM1AQ9BSK4 669 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 RBM4Q9BWF3 364 aaKnown RBP6.5□□□□□ -1.37
SMC1A-202ENST00000375340 CIPCQ9C0C6 399 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 FKBPLQ9UIM3 349 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 RPS6KA6Q9UK32 745 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 J3KR12 359 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 RECQL5O94762 991 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-202ENST00000375340 IFNA14P01570 189 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 UROSP10746 265 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 CYP3A5P20815 502 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 UFM1P61960 85 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 PITX1P78337 314 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-202ENST00000375340 INO80DQ53TQ3 878 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-202ENST00000375340 C10orf53Q8N6V4 93 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 TEKT5Q96M29 485 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 SLC9A8Q9Y2E8 581 aa6.5□□□□□ -1.37
SMC1A-202ENST00000375340 RFXANKO14593 260 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 MAGEB3O15480 346 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 FABP3P05413 133 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 ATP5C1P36542 298 aaKnown RBP6.49□□□□□ -1.37
SMC1A-202ENST00000375340 NIPAL4Q0D2K0 466 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 LCP2Q13094 533 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 CYP20A1Q6UW02 462 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 YAF2Q8IY57 180 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 ZNF614Q8N883 585 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 PTCD2Q8WV60 388 aaKnown RBP6.49□□□□□ -1.37
SMC1A-202ENST00000375340 RSPH1Q8WYR4 309 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 TSSK3Q96PN8 268 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 SPON1Q9HCB6 807 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 SOCS2O14508 198 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 TBX18O95935 607 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 GM2AP17900 193 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 RPL9P32969 192 aaKnown RBP6.49□□□□□ -1.37
SMC1A-202ENST00000375340 STT3AP46977 705 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 PRKG2Q13237 762 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 BRMS1LQ5PSV4 323 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 AHI1Q8N157 1196 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 SIGLEC10Q96LC7 697 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 EMILIN2Q9BXX0 1053 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 STRCQ7RTU9 1775 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 PLSCR1O15162 318 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 UGT2B11O75310 529 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 RGS20O76081 388 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 PIGFQ07326 219 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 TAF10Q12962 218 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 MED22Q15528 200 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 ARHGAP15Q53QZ3 475 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 SLC35F5Q8WV83 523 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 VPS35Q96QK1 796 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 IDH3BO43837 385 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 CBFA2T3O75081 653 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 ANXA5P08758 320 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 ATP6V0D1P61421 351 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 GK3PQ14409 553 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 LBX2Q6XYB7 198 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 USP45Q70EL2 814 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 EIF3MQ7L2H7 374 aaKnown RBP6.49□□□□□ -1.37
SMC1A-202ENST00000375340 GPRIN1Q7Z2K8 1008 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 TMEM245Q9H330 911 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 IPPKQ9H8X2 491 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 STARD7Q9NQZ5 370 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 EBF1Q9UH73 591 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 CCDC162PA2VCL2 907 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 H3BNX3 289 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 J3QRK9 145 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 CXCR6O00574 342 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 NRP1O14786 923 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 CDH5P33151 784 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-202ENST00000375340 SREBF2Q12772 1141 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 MERTKQ12866 999 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 HERC3Q15034 1050 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 MYLK3Q32MK0 819 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 DUSP28Q4G0W2 176 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 CCNYL2Q5T2Q4 361 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 UBE2R2Q712K3 238 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-202ENST00000375340 CPNE9Q8IYJ1 553 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 TBC1D19Q8N5T2 526 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 ATAD1Q8NBU5 361 aa6.49□□□□□ -1.37
SMC1A-202ENST00000375340 VANGL1Q8TAA9 524 aaPredicted RBP6.49□□□□□ -1.37
SMC1A-202ENST00000375340 FBXL8Q96CD0 374 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms