RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 MAMLD1Q13495 774 aa8.33□□□□□ -1.08
HSPG2-203ENST00000374695 KLHL22Q53GT1 634 aa8.33□□□□□ -1.08
HSPG2-203ENST00000374695 SLC27A1Q6PCB7 646 aa8.33□□□□□ -1.08
HSPG2-203ENST00000374695 NUP54Q7Z3B4 507 aa8.33□□□□□ -1.08
HSPG2-203ENST00000374695 CMTR2Q8IYT2 770 aaKnown RBP8.33□□□□□ -1.08
HSPG2-203ENST00000374695 ZNF433Q8N7K0 673 aaPredicted RBP8.33□□□□□ -1.08
HSPG2-203ENST00000374695 EDEM1Q92611 657 aa8.33□□□□□ -1.08
HSPG2-203ENST00000374695 TARBP1Q13395 1621 aaKnown RBP8.33□□□□□ -1.08
HSPG2-203ENST00000374695 NFASCO94856 1347 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 FAM237BA0A1B0GVD1 139 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ENDOD1O94919 500 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ANGPTL1O95841 491 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 PSKH1P11801 424 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 CCDC28AQ8IWP9 274 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 MTMR8Q96EF0 704 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 SLC35G4P0C7Q5 338 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 PORP16435 677 aaPredicted RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 LTKP29376 864 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 CHKAP35790 457 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ADAM15Q13444 863 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 CDKL4Q5MAI5 379 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 SPERTQ8NA61 448 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 SLC2A14Q8TDB8 520 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ATXN3LQ9H3M9 355 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ASB8Q9H765 288 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 HPF1Q9NWY4 346 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 TMX2Q9Y320 296 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ISPDA4D126 451 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 IFNW1P05000 195 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 LINGO3P0C6S8 592 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 BST1Q10588 318 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 GRIK4Q16099 956 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 FOXR2Q6PJQ5 311 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 CES3Q6UWW8 571 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 NCCRP1Q6ZVX7 275 aaPredicted RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 PDE10AQ9Y233 779 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 PCDHGB6Q9Y5F9 930 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 DOCK9Q9BZ29 2069 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 PRAMEF1O95521 474 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 HSPA14Q0VDF9 509 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 CHST4Q8NCG5 386 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 DCAKDQ8WVC6 231 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 POP1Q99575 1024 aaKnown RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 GPATCH2LQ9NWQ4 482 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ARHGAP20Q9P2F6 1191 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 EIF3KQ9UBQ5 218 aaKnown RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ZNF180Q9UJW8 692 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 AMPD1P23109 780 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 PCDH19Q8TAB3 1148 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 RCN3Q96D15 328 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ASAH2Q9NR71 780 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 PDP1Q9P0J1 537 aaPredicted RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 DPPA5A6NC42 116 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 KLRC2P26717 231 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 AP2S1P53680 142 aaPredicted RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 PLEKHG6Q3KR16 790 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 AHSA2Q719I0 299 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 KCTD15Q96SI1 283 aaPredicted RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 EBNA1BP2Q99848 306 aaKnown RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 OR12D3Q9UGF7 316 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 PCDHB1Q9Y5F3 818 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 COLEC10Q9Y6Z7 277 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 TSPAN5P62079 268 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 TXNL4AP83876 142 aaKnown RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ORC1Q13415 861 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 SNAP47Q5SQN1 464 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 DNAJB8Q8NHS0 232 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 MARK4Q96L34 752 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 KAT8Q9H7Z6 458 aaKnown RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 POLR3HQ9Y535 204 aaPredicted RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ZFC3H1O60293 1989 aaKnown RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 LAMA4Q16363 1823 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 CACNB4O00305 520 aaPredicted RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ITGA10O75578 1167 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 SRCP12931 536 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 RORAP35398 523 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 CAPN13Q6MZZ7 669 aaPredicted RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 KIAA0895Q8NCT3 520 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ZSWIM2Q8NEG5 633 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 FKBP7Q9Y680 259 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 UNC13CQ8NB66 2214 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ROBO2Q9HCK4 1378 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 EPCAMP16422 314 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 SEPHS1P49903 392 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 CUZD1Q86UP6 607 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 THRSPQ92748 146 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 RHOJQ9H4E5 214 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ZNHIT2Q9UHR6 403 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 TDRD6O60522 2096 aaKnown RBP8.32□□□□□ -1.08
HSPG2-203ENST00000374695 ELOVL7A1L3X0 281 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 KDM4BO94953 1096 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 CTDNEP1O95476 244 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 CRHR1P34998 444 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 CLCN3P51790 818 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 FBXL16Q8N461 479 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 LRRC19Q9H756 370 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 SCN2BO60939 215 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 CABYRO75952 493 aa8.32□□□□□ -1.08
HSPG2-203ENST00000374695 TRUB2O95900 331 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms