RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 DDIASQ8IXT1 998 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 PIANPQ8IYJ0 282 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 TRPC4APQ8TEL6 797 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 SUSD6Q92537 303 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 BIRC8Q96P09 236 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 SLC22A12Q96S37 553 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 GPR63Q9BZJ6 419 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 TRMT6Q9UJA5 497 aaKnown RBP12□□□□□ -0.49
HMGCL-202ENST00000374487 ADAMTS6Q9UKP5 1117 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 FCF1Q9Y324 198 aaKnown RBP12□□□□□ -0.49
HMGCL-202ENST00000374487 INSL5Q9Y5Q6 135 aa12□□□□□ -0.49
HMGCL-202ENST00000374487 LRRC14BA6NHZ5 514 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 E5RI56 91 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 STX16-NPEPL1H3BU86 382 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 PPP6CO00743 305 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 AZIN1O14977 448 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 OR1I1O60431 355 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 CRCPO75575 148 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 C8AP07357 584 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 SNRPB2P08579 225 aaKnown RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 FGF4P08620 206 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 XRCC1P18887 633 aaPredicted RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 EEF1DP29692 281 aaKnown RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 CBX2Q14781 532 aaPredicted RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 TSNQ15631 228 aaKnown RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 TRIP10Q15642 601 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 AAK1Q2M2I8 961 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 LARP4Q71RC2 724 aaKnown RBP eCLIP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 TMEM150AQ86TG1 271 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 TCEAL8Q8IYN2 117 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 UHRF1Q96T88 793 aaPredicted RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 KLHL4Q9C0H6 718 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 UTP6Q9NYH9 597 aaKnown RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 LHX3Q9UBR4 397 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 VPS51Q9UID3 782 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 MED16Q9Y2X0 877 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 DNAJC15Q9Y5T4 150 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 CPQQ9Y646 472 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 NCF1BA6NI72 391 aaPredicted RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 NCF1CA8MVU1 366 aaPredicted RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 ECI2O75521 394 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 NCF1P14598 390 aaPredicted RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 TCN1P20061 433 aaPredicted RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 PSMA3P25788 255 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 CSKP41240 450 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 IL2P60568 153 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 CLCQ05315 142 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 CDC16Q13042 620 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 CEACAM7Q14002 265 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 KIF19Q2TAC6 998 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 UGT3A2Q3SY77 523 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 ATXN7L2Q5T6C5 722 aaPredicted RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 LPCAT4Q643R3 524 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 TMEM154Q6P9G4 183 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 RNF111Q6ZNA4 994 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 MFN1Q8IWA4 741 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 PLCD3Q8N3E9 789 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 PCDH20Q8N6Y1 951 aaKnown RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 DDI1Q8WTU0 396 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 UCMAQ8WVF2 138 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 MIEF2Q96C03 454 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 ZFRQ96KR1 1074 aaKnown RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 NSUN5Q96P11 429 aaKnown RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 SLC25A23Q9BV35 468 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 VCXQ9H320 206 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 AKTIPQ9H8T0 292 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 SARS2Q9NP81 518 aaKnown RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 MRPL40Q9NQ50 206 aaKnown RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 OAS3Q9Y6K5 1087 aaKnown RBP11.99□□□□□ -0.49
HMGCL-202ENST00000374487 SLC30A1Q9Y6M5 507 aa11.99□□□□□ -0.49
HMGCL-202ENST00000374487 DOCK6Q96HP0 2047 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 A0A0U1RQS6 177 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 CDC7O00311 574 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 NIPSNAP2O75323 286 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 SMNDC1O75940 238 aaKnown RBP eCLIP11.98□□□□□ -0.49
HMGCL-202ENST00000374487 DPP6P42658 865 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 PTGER3P43115 390 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 ATXN3P54252 364 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-202ENST00000374487 PSME3P61289 254 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 ZP2Q05996 745 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 LCP2Q13094 533 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 SETMARQ53H47 684 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-202ENST00000374487 ARMC12Q5T9G4 340 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 ANKS6Q68DC2 871 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 RETSATQ6NUM9 610 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 GRASPQ7Z6J2 395 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-202ENST00000374487 GPR149Q86SP6 731 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 SIDT2Q8NBJ9 832 aaKnown RBP11.98□□□□□ -0.49
HMGCL-202ENST00000374487 BHLHE22Q8NFJ8 381 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-202ENST00000374487 TWIST2Q8WVJ9 160 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 FUBP1Q96AE4 644 aaKnown RBP11.98□□□□□ -0.49
HMGCL-202ENST00000374487 C3orf30Q96M34 536 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 C2orf49Q9BVC5 232 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-202ENST00000374487 TM6SF2Q9BZW4 377 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 SFXN1Q9H9B4 322 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 FBRSL1Q9HCM7 1045 aaKnown RBP11.98□□□□□ -0.49
HMGCL-202ENST00000374487 ZNF334Q9HCZ1 680 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-202ENST00000374487 SEMA4BQ9NPR2 832 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-202ENST00000374487 EPS15L1Q9UBC2 864 aa11.98□□□□□ -0.49
HMGCL-202ENST00000374487 GALPQ9UBC7 116 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms