RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 UPK3BL2E5RIL1 263 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 E9PBE3 544 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 GRID2O43424 1007 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 KLHL41O60662 606 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 ECI2O75521 394 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 SUPT7LO94864 414 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 TSPAN12O95859 305 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 ESRRAP11474 423 aaPredicted RBP16.74■□□□□ 0.27
PTPN20-203ENST00000374342 IMPDH1P20839 514 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 CALB2P22676 271 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 VIPR1P32241 457 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 CLCN7P51798 805 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 IL2P60568 153 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 PFKFB4Q16877 469 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 FNDC3BQ53EP0 1204 aaKnown RBP16.74■□□□□ 0.27
PTPN20-203ENST00000374342 ZNF678Q5SXM1 525 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 TANGO2Q6ICL3 276 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 ANKRD54Q6NXT1 300 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 SYCE2Q6PIF2 218 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 VITQ6UXI7 678 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 RAB44Q7Z6P3 723 aaPredicted RBP16.74■□□□□ 0.27
PTPN20-203ENST00000374342 STAG3L4Q8TBR4 150 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 LKAAEAR1Q8TD35 194 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 FAM83CQ9BQN1 747 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 CCDC106Q9BWC9 280 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 OSBPL1AQ9BXW6 950 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 EML4Q9HC35 981 aaKnown RBP16.74■□□□□ 0.27
PTPN20-203ENST00000374342 TCF7L2Q9NQB0 619 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 HPS4Q9NQG7 708 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 OBP2AQ9NY56 170 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 VTI1BQ9UEU0 232 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 CD84Q9UIB8 345 aa16.74■□□□□ 0.27
PTPN20-203ENST00000374342 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.74■□□□□ 0.27
PTPN20-203ENST00000374342 MYO9BQ13459 2157 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 TSPAN11A1L157 253 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 PRR5-ARHGAP8B1AHC4 643 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 SLCO1B7G3V0H7 640 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 RASSF9O75901 435 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 SNUPNO95149 360 aaKnown RBP16.73■□□□□ 0.27
PTPN20-203ENST00000374342 NCF2P19878 526 aaPredicted RBP16.73■□□□□ 0.27
PTPN20-203ENST00000374342 XPAP23025 273 aaPredicted RBP16.73■□□□□ 0.27
PTPN20-203ENST00000374342 PTPN5P54829 565 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 HERVK_113P63132 956 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 ELF3P78545 371 aaPredicted RBP16.73■□□□□ 0.27
PTPN20-203ENST00000374342 ARHGAP8P85298 464 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 GRM2Q14416 872 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 PDGFRLQ15198 375 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 TBCCQ15814 346 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 CUZD1Q86UP6 607 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 CLDN19Q8N6F1 224 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 PLEKHG4BQ96PX9 1271 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 OR52B2Q96RD2 323 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 ERVK-6Q9BXR3 956 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 NSUN3Q9H649 340 aaKnown RBP16.73■□□□□ 0.27
PTPN20-203ENST00000374342 WDR55Q9H6Y2 383 aaPredicted RBP16.73■□□□□ 0.27
PTPN20-203ENST00000374342 TRPV4Q9HBA0 871 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 PKD2L2Q9NZM6 624 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 CDH7Q9ULB5 785 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 PLA2G4CQ9UP65 541 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 REV3LO60673 3130 aa16.73■□□□□ 0.27
PTPN20-203ENST00000374342 SIX3O95343 332 aaPredicted RBP16.72■□□□□ 0.27
PTPN20-203ENST00000374342 JUNP05412 331 aaKnown RBP16.72■□□□□ 0.27
PTPN20-203ENST00000374342 MTHFD2P13995 350 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 TSPAN8P19075 237 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 PTPN4P29074 926 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 CPA2P48052 419 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 SPINT3P49223 89 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 VASPP50552 380 aaPredicted RBP16.72■□□□□ 0.27
PTPN20-203ENST00000374342 CYB5D1Q6P9G0 228 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 FBXO39Q8N4B4 442 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 KDM1BQ8NB78 822 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 RAB3IPQ96QF0 476 aaPredicted RBP16.72■□□□□ 0.27
PTPN20-203ENST00000374342 GDF15Q99988 308 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 ABCG8Q9H221 673 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 ZFP14Q9HCL3 533 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 PCDH12Q9NPG4 1184 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 CDYLQ9Y232 598 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 DHRS7Q9Y394 339 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 DENND4AQ7Z401 1863 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 LRRC14BA6NHZ5 514 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 NCF1BA6NI72 391 aaPredicted RBP16.72■□□□□ 0.27
PTPN20-203ENST00000374342 SYCE1LA8MT33 242 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 NCF1CA8MVU1 366 aaPredicted RBP16.72■□□□□ 0.27
PTPN20-203ENST00000374342 SKAP2O75563 359 aaPredicted RBP16.72■□□□□ 0.27
PTPN20-203ENST00000374342 TRIM16O95361 564 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 HLA-EP13747 358 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 NCF1P14598 390 aaPredicted RBP16.72■□□□□ 0.27
PTPN20-203ENST00000374342 ZNF30P17039 623 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 EPHA3P29320 983 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 ATP13A5Q4VNC0 1218 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 UNC50Q53HI1 259 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 ZNF805Q5CZA5 627 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 NAIF1Q69YI7 327 aaPredicted RBP16.72■□□□□ 0.27
PTPN20-203ENST00000374342 ACAD11Q709F0 780 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 SFTPA1Q8IWL2 248 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 CPA6Q8N4T0 437 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 AFAP1L2Q8N4X5 818 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 FUBP1Q96AE4 644 aaKnown RBP16.72■□□□□ 0.27
PTPN20-203ENST00000374342 TNFRSF12AQ9NP84 129 aa16.72■□□□□ 0.27
PTPN20-203ENST00000374342 SORCS3Q9UPU3 1222 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms