RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 KCTD11Q693B1 232 aa11.71□□□□□ -0.53
PACSIN1-202ENST00000374043 SH2D5Q6ZV89 423 aa11.71□□□□□ -0.53
PACSIN1-202ENST00000374043 TRMT11Q7Z4G4 463 aaKnown RBP11.71□□□□□ -0.53
PACSIN1-202ENST00000374043 C11orf74Q86VG3 221 aa11.71□□□□□ -0.53
PACSIN1-202ENST00000374043 ZNF296Q8WUU4 475 aaPredicted RBP11.71□□□□□ -0.53
PACSIN1-202ENST00000374043 CANT1Q8WVQ1 401 aa11.71□□□□□ -0.53
PACSIN1-202ENST00000374043 PTERQ96BW5 349 aa11.71□□□□□ -0.53
PACSIN1-202ENST00000374043 CCDC28BQ9BUN5 200 aa11.71□□□□□ -0.53
PACSIN1-202ENST00000374043 ERVK-6Q9BXR3 956 aa11.71□□□□□ -0.53
PACSIN1-202ENST00000374043 DHRS12A0PJE2 317 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 NPHS1O60500 1241 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 ZNF284Q2VY69 593 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 ZFP1Q6P2D0 407 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 AAGABQ6PD74 315 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 ZNF621Q6ZSS3 439 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 CYS1Q717R9 158 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 EFL1Q7Z2Z2 1120 aaKnown RBP11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 KBTBD2Q8IY47 623 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 FAM120BQ96EK7 910 aaKnown RBP11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 NSUN3Q9H649 340 aaKnown RBP11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 ZBTB26Q9HCK0 441 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 MKS1Q9NXB0 559 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 KIF17Q9P2E2 1029 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 CORO1CQ9ULV4 474 aaPredicted RBP11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 GLYATL1P3A0A0U1RQE8 302 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 UPK3BL1B0FP48 263 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 UPK3BL2E5RIL1 263 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 MSH3P20585 1137 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 SOAT1P35610 550 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 ATP6V0D1P61421 351 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 PRKG2Q13237 762 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 DENND5AQ6IQ26 1287 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 CCDC81Q6ZN84 652 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 PIANPQ8IYJ0 282 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 OFCC1Q8IZS5 231 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 KDM1BQ8NB78 822 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 SLC22A17Q8WUG5 538 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 COPS8Q99627 209 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 HAUS8Q9BT25 410 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 COQ10BQ9H8M1 238 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 TLR9Q9NR96 1032 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 DNAH12Q6ZR08 3092 aa11.71□□□□□ -0.54
PACSIN1-202ENST00000374043 TRAV19A0A0A6YYK7 116 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 ZNF840PA6NDX5 716 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 PTGES3LE9PB15 166 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 ZNF197O14709 1029 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 STC2O76061 302 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 MYO1DO94832 1006 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 C8AP07357 584 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 EPB42P16452 691 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 GSTT1P30711 240 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 STC1P52823 247 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 CASP9P55211 416 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 MS4A2Q01362 244 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 MBTPS1Q14703 1052 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 AASDHQ4L235 1098 aaPredicted RBP11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 TRAPPC5Q8IUR0 188 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 FAM47BQ8NA70 645 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 AARSD1Q9BTE6 412 aaKnown RBP11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 IGFLR1Q9H665 355 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 PCDHGB4Q9UN71 923 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 LZTS1Q9Y250 596 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 LRRC42Q9Y546 428 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 INPPL1O15357 1258 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 GNAZP19086 355 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 DGKAP23743 735 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 PRDX3P30048 256 aaKnown RBP11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 HTR7P34969 479 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 CTNNB1P35222 781 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 SNRPD1P62314 119 aaKnown RBP11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 SH3BP2P78314 561 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 TRIM25Q14258 630 aaKnown RBP11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 KDELC1Q6UW63 502 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 MBOAT1Q6ZNC8 495 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 MFSD6LQ8IWD5 586 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 PGBD5Q8N414 524 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 OR13J1Q8NGT2 312 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 ZNF461Q8TAF7 563 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 MPP4Q96JB8 637 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 FOPNLQ96NB1 174 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 RNF38Q9H0F5 515 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 OSGEPL1Q9H4B0 414 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 CDK14O94921 469 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 WDR47O94967 919 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 CLIC3O95833 236 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 LDLRP01130 860 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 F5P12259 2224 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 ZNF37AP17032 561 aaPredicted RBP11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 HNF4AP41235 474 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 WASP42768 502 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 KCNC1P48547 511 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 NEK2P51955 445 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 UFM1P61960 85 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 PHEXP78562 749 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 MAPKAPK3Q16644 382 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 ARHGAP15Q53QZ3 475 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 USP45Q70EL2 814 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 ITFG1Q8TB96 612 aa11.7□□□□□ -0.54
PACSIN1-202ENST00000374043 CYB5D2Q8WUJ1 264 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms