RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ASLP04424 464 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 TACR2P21452 398 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 GRK3P35626 688 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 CDH15P55291 814 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 GTF2H2Q13888 395 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 GTF2H2CQ6P1K8 395 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 TPGS1Q6ZTW0 290 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 ZC3H7AQ8IWR0 971 aaKnown RBP17.29■□□□□ 0.36
PTPRU-202ENST00000373779 RAB2BQ8WUD1 216 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 TRIM63Q969Q1 353 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 MYO19Q96H55 970 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 SMAD5Q99717 465 aaKnown RBP17.29■□□□□ 0.36
PTPRU-202ENST00000373779 VRTNQ9H8Y1 702 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 SLC2A6Q9UGQ3 507 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.29■□□□□ 0.36
PTPRU-202ENST00000373779 PDLIM1O00151 329 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 IRAK2O43187 625 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 RGS10O43665 173 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 CAPN1P07384 714 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 ITGA1P56199 1179 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 LRRC58Q96CX6 371 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 HDHD2Q9H0R4 259 aa17.29■□□□□ 0.36
PTPRU-202ENST00000373779 ARIH1Q9Y4X5 557 aaPredicted RBP17.29■□□□□ 0.36
PTPRU-202ENST00000373779 SNNO75324 88 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-202ENST00000373779 DMPKQ09013 629 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 ACOX1Q15067 660 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 PHF12Q96QT6 1004 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 OSBPL2Q9H1P3 480 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 PDP1Q9P0J1 537 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-202ENST00000373779 SLC25A14O95258 325 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-202ENST00000373779 RAP2AP10114 183 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 NR4A1P22736 598 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 GALNT2Q10471 571 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 SH3D19Q5HYK7 790 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 HJURPQ8NCD3 748 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-202ENST00000373779 DOLKQ9UPQ8 538 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 FAM234BA2RU67 622 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 IL12AP29459 219 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 CCR10P46092 362 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 SMYD5Q6GMV2 418 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 HBEGFQ99075 208 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 NPY6RQ99463 290 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 MFSD1Q9H3U5 465 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 TLE6Q9H808 572 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 KLHL28Q9NXS3 571 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 ANGPT4Q9Y264 503 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 TRIM43BA6NCK2 446 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 FTH1P02794 183 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 WEE1P30291 646 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 CACNG1Q06432 222 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 SIDT2Q8NBJ9 832 aaKnown RBP17.28■□□□□ 0.36
PTPRU-202ENST00000373779 PHF10Q8WUB8 498 aaKnown RBP17.28■□□□□ 0.36
PTPRU-202ENST00000373779 RBPJLQ9UBG7 517 aa17.28■□□□□ 0.36
PTPRU-202ENST00000373779 TSC22D2O75157 780 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 PDE9AO76083 593 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 DHRS4L1P0CG22 281 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 GRK4P32298 578 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 GSTM5P46439 218 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 HSPA7P48741 367 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 PFKPQ01813 784 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 CIR1Q86X95 450 aaPredicted RBP17.27■□□□□ 0.36
PTPRU-202ENST00000373779 ARRDC4Q8NCT1 418 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 OR10A6Q8NH74 314 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 PPP1R14BQ96C90 147 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 COPS8Q99627 209 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 KIFC1Q9BW19 673 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 ARMC7Q9H6L4 198 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 SPG21Q9NZD8 308 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 OR51F1A6NGY5 319 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 SGTAO43765 313 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 RGS20O76081 388 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 PPIBP23284 216 aaKnown RBP17.27■□□□□ 0.36
PTPRU-202ENST00000373779 MAPKAPK2P49137 400 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 EEFSECP57772 596 aaKnown RBP17.27■□□□□ 0.36
PTPRU-202ENST00000373779 MTPNP58546 118 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 UTP4Q969X6 686 aaKnown RBP17.27■□□□□ 0.36
PTPRU-202ENST00000373779 LRRC3Q9BY71 257 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 RASSF1Q9NS23 344 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 ARL5AQ9Y689 179 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 IRS2Q9Y4H2 1338 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.36
PTPRU-202ENST00000373779 CACNA1SQ13698 1873 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 IL12RB1P42701 662 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 RAB14P61106 215 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 PLEKHG4Q58EX7 1191 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 CYS1Q717R9 158 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 ATAD1Q8NBU5 361 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 GPR156Q8NFN8 814 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 FCRL3Q96P31 734 aaPredicted RBP17.27■□□□□ 0.36
PTPRU-202ENST00000373779 DEPDC7Q96QD5 511 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 WDR70Q9NW82 654 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 EURLQ9NYK6 297 aa17.27■□□□□ 0.36
PTPRU-202ENST00000373779 A6NHS1 94 aa17.27■□□□□ 0.35
PTPRU-202ENST00000373779 CLDN25C9JDP6 229 aa17.27■□□□□ 0.35
PTPRU-202ENST00000373779 SIX3O95343 332 aaPredicted RBP17.27■□□□□ 0.35
PTPRU-202ENST00000373779 CCR3P51677 355 aa17.27■□□□□ 0.35
PTPRU-202ENST00000373779 RBM20Q5T481 1227 aaKnown RBP17.27■□□□□ 0.35
PTPRU-202ENST00000373779 UBE2R2Q712K3 238 aaPredicted RBP17.27■□□□□ 0.35
PTPRU-202ENST00000373779 SCAMP5Q8TAC9 235 aa17.27■□□□□ 0.35
PTPRU-202ENST00000373779 Q96MT0 163 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms