RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 KCTD3Q9Y597 815 aa11.88□□□□□ -0.51
HDAC8-201ENST00000373554 ST14Q9Y5Y6 855 aa11.88□□□□□ -0.51
HDAC8-201ENST00000373554 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.88□□□□□ -0.51
HDAC8-201ENST00000373554 ZNF106Q9H2Y7 1883 aaKnown RBP11.88□□□□□ -0.51
HDAC8-201ENST00000373554 HEATR9A2RTY3 570 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 FAM149AA5PLN7 773 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 GAPDHSO14556 408 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-201ENST00000373554 CHUKO15111 745 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 KMOO15229 486 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 UGT1A9O60656 530 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 PHF2O75151 1096 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 GLB1P16278 677 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 UGT1A6P19224 532 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 UGT1A1P22309 533 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 UGT1A4P22310 534 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 UGT1A3P35503 534 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 UGT1A5P35504 534 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 CLDN6P56747 220 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 TMPRSS15P98073 1019 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 TMEM115Q12893 351 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-201ENST00000373554 NFATC2Q13469 925 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 LAMB3Q13751 1172 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 HLTFQ14527 1009 aaKnown RBP eCLIP11.87□□□□□ -0.51
HDAC8-201ENST00000373554 CYP1B1Q16678 543 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 KHDC1Q4VXA5 237 aaKnown RBP11.87□□□□□ -0.51
HDAC8-201ENST00000373554 PERM1Q5SV97 790 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 CERCAMQ5T4B2 595 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 GPRC6AQ5T6X5 926 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 TTC27Q6P3X3 843 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 CCDC137Q6PK04 289 aaKnown RBP11.87□□□□□ -0.51
HDAC8-201ENST00000373554 UNQ6494/PRO21346Q6UXR6 183 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 CCNI2Q6ZMN8 369 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-201ENST00000373554 TRAPPC5Q8IUR0 188 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 GRK7Q8WTQ7 553 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 STYXQ8WUJ0 223 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 ULK4Q96C45 1275 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 DEPDC7Q96QD5 511 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 NAPGQ99747 312 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-201ENST00000373554 CCDC3Q9BQI4 270 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 OSGEPL1Q9H4B0 414 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 UGT1A7Q9HAW7 530 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 UGT1A10Q9HAW8 530 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 UGT1A8Q9HAW9 530 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 SMARCAL1Q9NZC9 954 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 TMPRSS11EQ9UL52 423 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 PLEKHM1Q9Y4G2 1056 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 PCYT1BQ9Y5K3 369 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-201ENST00000373554 SLC30A1Q9Y6M5 507 aa11.87□□□□□ -0.51
HDAC8-201ENST00000373554 ANKRD11Q6UB99 2663 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-201ENST00000373554 CTAGE9A4FU28 777 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 RHPN2P1A8MT19 583 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 H7C0S8 307 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 AP3B1O00203 1094 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 CCL22O00626 93 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 ZNF185O15231 689 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 ZW10O43264 779 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 NUDT21O43809 227 aaKnown RBP11.86□□□□□ -0.51
HDAC8-201ENST00000373554 TCEA3O75764 348 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 ECEL1O95672 775 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 MT-CO3P00414 261 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 RALBP11234 206 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 SLC2A4P14672 509 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 VCLP18206 1134 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 MSH3P20585 1137 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 MC4RP32245 332 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 COILP38432 576 aaPredicted RBP11.86□□□□□ -0.51
HDAC8-201ENST00000373554 FNTAP49354 379 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 VPS41P49754 854 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 MAZP56270 477 aaKnown RBP11.86□□□□□ -0.51
HDAC8-201ENST00000373554 XIAPP98170 497 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 TARDBPQ13148 414 aaKnown RBP eCLIP11.86□□□□□ -0.51
HDAC8-201ENST00000373554 SPIDRQ14159 915 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 TRIP13Q15645 432 aaPredicted RBP11.86□□□□□ -0.51
HDAC8-201ENST00000373554 PLA2G4EQ3MJ16 856 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 GPR33Q49SQ1 333 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 SNX20Q7Z614 316 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 SFTPA2Q8IWL1 248 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 NAGSQ8N159 534 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 CACTIN-AS1Q8N1I8 211 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 DCBLD1Q8N8Z6 715 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 PPHLN1Q8NEY8 458 aaKnown RBP11.86□□□□□ -0.51
HDAC8-201ENST00000373554 TIMM29Q9BSF4 260 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 STN1Q9H668 368 aaKnown RBP11.86□□□□□ -0.51
HDAC8-201ENST00000373554 CASS4Q9NQ75 786 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 NLE1Q9NVX2 485 aaPredicted RBP11.86□□□□□ -0.51
HDAC8-201ENST00000373554 LRIT1Q9P2V4 623 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 SAR1BQ9Y6B6 198 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 RNF215Q9Y6U7 377 aa11.86□□□□□ -0.51
HDAC8-201ENST00000373554 SETXQ7Z333 2677 aaKnown RBP11.86□□□□□ -0.51
HDAC8-201ENST00000373554 GOLGA4Q13439 2230 aaKnown RBP11.86□□□□□ -0.51
HDAC8-201ENST00000373554 PTPRBP23467 1997 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 CCDC78A2IDD5 438 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 MROH6A6NGR9 719 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 AGAP14A8MT82 685 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 CFAP99D6REC4 459 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 SNX2O60749 519 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 KRT14P02533 472 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 F3P13726 295 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 PNLIPP16233 465 aa11.85□□□□□ -0.51
HDAC8-201ENST00000373554 ZNF7P17097 686 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms