RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 SNX33Q8WV41 574 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 CCDC177Q9NQR7 707 aaPredicted RBP11.46□□□□□ -0.57
VCL-202ENST00000372755 SNX7Q9UNH6 387 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 C2orf80Q0P641 193 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 NAT16Q8N8M0 369 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 STYXQ8WUJ0 223 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 SLC38A4Q969I6 547 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 MECRQ9BV79 373 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 NOL11Q9H8H0 719 aaKnown RBP11.46□□□□□ -0.57
VCL-202ENST00000372755 MAN2B2Q9Y2E5 1009 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 RAI2Q9Y5P3 530 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 DISP2A7MBM2 1401 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 B4GALT5O43286 388 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 S100A6P06703 90 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 MASP1P48740 699 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 SLC5A9Q2M3M2 681 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 DCST1Q5T197 706 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 LCN1P1Q5VSP4 162 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 GALNT13Q8IUC8 556 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 PARP8Q8N3A8 854 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 CLHC1Q8NHS4 586 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 XAGE5Q8WWM1 108 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 C11orf24Q96F05 449 aaPredicted RBP11.46□□□□□ -0.57
VCL-202ENST00000372755 TCF25Q9BQ70 676 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 FKBP14Q9NWM8 211 aa11.46□□□□□ -0.57
VCL-202ENST00000372755 FAM240BA0A1B0GVZ2 78 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 PRR5-ARHGAP8B1AHC4 643 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 TIPRLO75663 272 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 NDST3O95803 873 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 RHOQP17081 205 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 MPSTP25325 297 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 HOXC12P31275 282 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 ARHGAP8P85298 464 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 KLF10Q13118 480 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 MED27Q6P2C8 311 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 CADM2Q8N3J6 435 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 GLIS3Q8NEA6 775 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 OR4K2Q8NGD2 314 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 PPTC7Q8NI37 304 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 RIT1Q92963 219 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 KLHL32Q96NJ5 620 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.46□□□□□ -0.581e-7■■■□□ 18.3
VCL-202ENST00000372755 ERVW-1Q9UQF0 538 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 PLLPQ9Y342 182 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 A0A1W2PPM1 405 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 ELOVL7A1L3X0 281 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 KMOO15229 486 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 BRCC3P46736 316 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 RGS8P57771 180 aaPredicted RBP11.46□□□□□ -0.58
VCL-202ENST00000372755 CCDC80Q76M96 950 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 MSL3Q8N5Y2 521 aaKnown RBP11.46□□□□□ -0.58
VCL-202ENST00000372755 ZNF433Q8N7K0 673 aaPredicted RBP11.46□□□□□ -0.58
VCL-202ENST00000372755 PDPRQ8NCN5 879 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 PIGXQ8TBF5 258 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 TWIST2Q8WVJ9 160 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 SLC44A1Q8WWI5 657 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 S100A14Q9HCY8 104 aa11.46□□□□□ -0.58
VCL-202ENST00000372755 HBS1LQ9Y450 684 aaKnown RBP11.46□□□□□ -0.58
VCL-202ENST00000372755 SLC30A4O14863 429 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 IRF6O14896 467 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 APOC1P02654 83 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
VCL-202ENST00000372755 CD247P20963 164 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 PSMA1P25786 263 aaKnown RBP11.45□□□□□ -0.58
VCL-202ENST00000372755 ADRA1BP35368 520 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 PSMD8P48556 350 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 CDH4P55283 916 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 SMU1Q2TAY7 513 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 VPS26BQ4G0F5 336 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 C15orf52Q6ZUT6 534 aaKnown RBP11.45□□□□□ -0.58
VCL-202ENST00000372755 CHST9Q7L1S5 443 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 SLC26A9Q7LBE3 791 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 OR6K2Q8NGY2 324 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 FAM81AQ8TBF8 368 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 LRRN4Q8WUT4 740 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 SLC9A6Q92581 669 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 PIGKQ92643 395 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 RFKQ969G6 155 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 IL1RAPQ9NPH3 570 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 TP73O15350 636 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 CDK14O94921 469 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 AP2A2O94973 939 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 ASLP04424 464 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 ROR2Q01974 943 aaKnown RBP11.45□□□□□ -0.58
VCL-202ENST00000372755 NRG1Q02297 640 aaPredicted RBP11.45□□□□□ -0.58
VCL-202ENST00000372755 PCDH1Q08174 1060 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 INTS6LQ5JSJ4 861 aaKnown RBP11.45□□□□□ -0.58
VCL-202ENST00000372755 CXorf57Q6NSI4 855 aaKnown RBP11.45□□□□□ -0.58
VCL-202ENST00000372755 PSRC1Q6PGN9 363 aaPredicted RBP11.45□□□□□ -0.58
VCL-202ENST00000372755 RASSF6Q6ZTQ3 369 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 RANBP3LQ86VV4 465 aaPredicted RBP11.45□□□□□ -0.58
VCL-202ENST00000372755 SPPL2CQ8IUH8 684 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 OR5T3Q8NGG3 340 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 GPR152Q8TDT2 470 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 GIPC3Q8TF64 312 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 NEUROD4Q9HD90 331 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 ZDHHC4Q9NPG8 344 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 ATXN10Q9UBB4 475 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 RIC1Q4ADV7 1423 aa11.45□□□□□ -0.58
VCL-202ENST00000372755 MEGF6O75095 1541 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms