RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 KCTD14Q9BQ13 255 aaPredicted RBP12.65□□□□□ -0.38
CTPS1-202ENST00000372621 PCDHB5Q9Y5E4 795 aa12.65□□□□□ -0.38
CTPS1-202ENST00000372621 TYW5A2RUC4 315 aaKnown RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 SLC22A3O75751 556 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 CLIC3O95833 236 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 C1RP00736 705 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 HRH2P25021 359 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 HK3P52790 923 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 TAF1CQ15572 869 aaPredicted RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 NANOGP8Q6NSW7 305 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 TXNDC11Q6PKC3 985 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 AFTPHQ6ULP2 937 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 TBC1D21Q8IYX1 336 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 FBXO32Q969P5 355 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 DOK1Q99704 481 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 SEZ6LQ9BYH1 1024 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 NANOGQ9H9S0 305 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 TMEM45AQ9NWC5 275 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 LEF1Q9UJU2 399 aaPredicted RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 CDH7Q9ULB5 785 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 ST14Q9Y5Y6 855 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 SLC12A8A0AV02 714 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 NPEPPSL1A6NEC2 478 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 CCDC154A6NI56 674 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 ENPP3O14638 875 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 BAIAP3O94812 1187 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 MLYCDO95822 493 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 PYGLP06737 847 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 HTR1EP28566 365 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 RANBP1P43487 201 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 RGRP47804 291 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 POLR2JP52435 117 aaKnown RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 ERVK-8P63133 956 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 MYBPC3Q14896 1274 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 C10orf120Q5SQS8 335 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 EFL1Q7Z2Z2 1120 aaKnown RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 PATL1Q86TB9 770 aaKnown RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 RTN4RL1Q86UN2 441 aaPredicted RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 NKAPQ8N5F7 415 aaKnown RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 ATAD1Q8NBU5 361 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 OR4K2Q8NGD2 314 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 PROKR1Q8TCW9 393 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 GFM2Q969S9 779 aaKnown RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 C12orf43Q96C57 262 aaKnown RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 TMEM74Q96NL1 305 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 RPF2Q9H7B2 306 aaKnown RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 INTS7Q9NVH2 962 aaKnown RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 SMPD3Q9NY59 655 aaPredicted RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 ZIM2Q9NZV7 527 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 ANAPC2Q9UJX6 822 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 ASB1Q9Y576 335 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 KANSL1LA0AUZ9 987 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 DYTNA2CJ06 578 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 E2F3O00716 465 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 CRCPO75575 148 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 SOAT2O75908 522 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 CELF2O95319 508 aaKnown RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 NPPAP01160 153 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 PRLP01236 227 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 TACR2P21452 398 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 CD9P21926 228 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 CTGFP29279 349 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 CAPGP40121 348 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 CDKN1CP49918 316 aaPredicted RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 ESRRGP62508 458 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 EMX2Q04743 252 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 TAF10Q12962 218 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 TAF1AQ15573 450 aaPredicted RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 TRIM71Q2Q1W2 868 aaKnown RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 PYCR3Q53H96 274 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 FAM26DQ5JW98 314 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 CLLU1OSQ5K130 101 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 VARS2Q5ST30 1063 aaKnown RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 IFNEQ86WN2 208 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 CLVS1Q8IUQ0 354 aaPredicted RBP12.64□□□□□ -0.39
CTPS1-202ENST00000372621 LZICQ8WZA0 190 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 PLEKHG4BQ96PX9 1271 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 PSKH2Q96QS6 385 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 ACOX2Q99424 681 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 SYT17Q9BSW7 474 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 ZBED2Q9BTP6 218 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 USP22Q9UPT9 525 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 FADS3Q9Y5Q0 445 aa12.64□□□□□ -0.39
CTPS1-202ENST00000372621 BTN3A1O00481 513 aa12.63□□□□□ -0.39
CTPS1-202ENST00000372621 CLOCKO15516 846 aa12.63□□□□□ -0.39
CTPS1-202ENST00000372621 SNAP91O60641 907 aa12.63□□□□□ -0.39
CTPS1-202ENST00000372621 RPS9P46781 194 aaKnown RBP12.63□□□□□ -0.39
CTPS1-202ENST00000372621 ADARP55265 1226 aaKnown RBP12.63□□□□□ -0.39
CTPS1-202ENST00000372621 NUP107P57740 925 aa12.63□□□□□ -0.39
CTPS1-202ENST00000372621 ABRAXAS1Q6UWZ7 409 aa12.63□□□□□ -0.39
CTPS1-202ENST00000372621 LYSMD3Q7Z3D4 306 aa12.63□□□□□ -0.39
CTPS1-202ENST00000372621 BPIFB1Q8TDL5 484 aa12.63□□□□□ -0.39
CTPS1-202ENST00000372621 CYGBQ8WWM9 190 aa12.63□□□□□ -0.39
CTPS1-202ENST00000372621 HGH1Q9BTY7 390 aa12.63□□□□□ -0.39
CTPS1-202ENST00000372621 TLR8Q9NR97 1041 aaKnown RBP12.63□□□□□ -0.39
CTPS1-202ENST00000372621 CDC14AQ9UNH5 594 aa12.63□□□□□ -0.39
CTPS1-202ENST00000372621 FAM234BA2RU67 622 aa12.63□□□□□ -0.39
CTPS1-202ENST00000372621 GRXCR2A6NFK2 248 aa12.63□□□□□ -0.39
CTPS1-202ENST00000372621 TRIM64BA6NI03 449 aa12.63□□□□□ -0.39
CTPS1-202ENST00000372621 NCF1BA6NI72 391 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms