RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ZNF8P17098 575 aaPredicted RBP14.67□□□□□ -0.06
COL9A1-204ENST00000370496 MSH3P20585 1137 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 SIM1P81133 766 aaPredicted RBP14.67□□□□□ -0.06
COL9A1-204ENST00000370496 CACNG1Q06432 222 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 LRP8Q14114 963 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 PLA2G4EQ3MJ16 856 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 KHDC1Q4VXA5 237 aaKnown RBP14.67□□□□□ -0.06
COL9A1-204ENST00000370496 PYCR3Q53H96 274 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 C6orf132Q5T0Z8 1188 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 SLC30A9Q6PML9 568 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 AFTPHQ6ULP2 937 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 ZNF572Q7Z3I7 529 aaPredicted RBP14.67□□□□□ -0.06
COL9A1-204ENST00000370496 MAATS1Q7Z4T9 603 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 ADGRG6Q86SQ4 1221 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 HOOK3Q86VS8 718 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 SDR16C5Q8N3Y7 309 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 GLMNQ92990 594 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 SCARF2Q96GP6 870 aaPredicted RBP14.67□□□□□ -0.06
COL9A1-204ENST00000370496 SNF8Q96H20 258 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 CDKN2AIPNLQ96HQ2 116 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 FAM96AQ9H5X1 160 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 SIRPGQ9P1W8 387 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 SLC2A6Q9UGQ3 507 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 PRKAB1Q9Y478 270 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 SPTBN4Q9H254 2564 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 DCHS1Q96JQ0 3298 aa14.67□□□□□ -0.06
COL9A1-204ENST00000370496 CCDC162PA2VCL2 907 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 EFCAB8A8MWE9 144 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 B4DGG1 531 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 CFAP99D6REC4 459 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 TPP1O14773 563 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 NDC80O14777 642 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 YY2O15391 372 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 RAD51CO43502 376 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 TNFSF14O43557 240 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 FUCA1P04066 466 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 GIMD1P0DJR0 217 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 RALBP11234 206 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 ACP5P13686 325 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 ACTR1BP42025 376 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 ARSDP51689 593 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 ACTR1AP61163 376 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 MORF4L2Q15014 288 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 INSCQ1MX18 579 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 GPR33Q49SQ1 333 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 CCDC157Q569K6 752 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 CHST15Q7LFX5 561 aaPredicted RBP14.66□□□□□ -0.06
COL9A1-204ENST00000370496 TAS2R42Q7RTR8 314 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 LRRTM4Q86VH4 590 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 CAND1Q86VP6 1230 aaKnown RBP14.66□□□□□ -0.06
COL9A1-204ENST00000370496 NXPE1Q8N323 547 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 FAM46DQ8NEK8 389 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 OR13J1Q8NGT2 312 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 OR6P1Q8NGX9 317 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 CCL4L1Q8NHW4 92 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 PEX13Q92968 403 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 DCUN1D1Q96GG9 259 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 APOLD1Q96LR9 279 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 MRM3Q9HC36 420 aaKnown RBP14.66□□□□□ -0.06
COL9A1-204ENST00000370496 CHRAC1Q9NRG0 131 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 NCKIPSDQ9NZQ3 722 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 RIMKLBQ9ULI2 386 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 GPR34Q9UPC5 381 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 MRFAP1Q9Y605 127 aa14.66□□□□□ -0.06
COL9A1-204ENST00000370496 FAM187AA6NFU0 413 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 OR51F1A6NGY5 319 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 ACRV1P26436 265 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 AK4P27144 223 aaPredicted RBP14.65□□□□□ -0.06
COL9A1-204ENST00000370496 RPIAP49247 311 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 MRPS25P82663 173 aaKnown RBP14.65□□□□□ -0.06
COL9A1-204ENST00000370496 CTBSQ01459 385 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 TMEM115Q12893 351 aaPredicted RBP14.65□□□□□ -0.06
COL9A1-204ENST00000370496 TUBB2AQ13885 445 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 PROX2Q3B8N5 592 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 C8orf74Q6P047 294 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 LVRNQ6Q4G3 990 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 DET1Q7L5Y6 550 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 OTUD6BQ8N6M0 293 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 ARL10Q8N8L6 244 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 KYQ8NBH2 561 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 MNS1Q8NEH6 495 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 GPBAR1Q8TDU6 330 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 HDAC10Q969S8 669 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 ZNF778Q96MU6 729 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 COPS8Q99627 209 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 TUBB2BQ9BVA1 445 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 DPEP2Q9H4A9 486 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 OSGEPL1Q9H4B0 414 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 TAAR2Q9P1P5 351 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 SOX13Q9UN79 622 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 PCYT1BQ9Y5K3 369 aaPredicted RBP14.65□□□□□ -0.06
COL9A1-204ENST00000370496 MAD1L1Q9Y6D9 718 aa14.65□□□□□ -0.06
COL9A1-204ENST00000370496 SDR42E2A6NKP2 422 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 OR2AG2A6NM03 316 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 CHUKO15111 745 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 KMOO15229 486 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 SEC31AO94979 1220 aaKnown RBP14.64□□□□□ -0.07
COL9A1-204ENST00000370496 GOT2P00505 430 aaKnown RBP14.64□□□□□ -0.07
COL9A1-204ENST00000370496 FTH1P19P0C7X4 201 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 PRSS56P0CW18 603 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms