RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 TAS2R13Q9NYV9 303 aa12.2□□□□□ -0.46
TUBE1-202ENST00000368662 PRR23AA6NEV1 266 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 FAM47DPA6NHR8 397 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 COPEO14579 308 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 PRPF4O43172 522 aaKnown RBP eCLIP12.19□□□□□ -0.46
TUBE1-202ENST00000368662 SLC25A14O95258 325 aaPredicted RBP12.19□□□□□ -0.46
TUBE1-202ENST00000368662 SEMA4FO95754 770 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 DCNP07585 359 aaKnown RBP12.19□□□□□ -0.46
TUBE1-202ENST00000368662 MSH3P20585 1137 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 SAT1P21673 171 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 CD6P30203 668 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 AKT1P31749 480 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 SLC26A3P40879 764 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 SKIV2L2P42285 1042 aaKnown RBP12.19□□□□□ -0.46
TUBE1-202ENST00000368662 SLC18A1P54219 525 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 RBM20Q5T481 1227 aaKnown RBP12.19□□□□□ -0.46
TUBE1-202ENST00000368662 UGT3A1Q6NUS8 523 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 PNCKQ6P2M8 343 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 ZNF549Q6P9A3 640 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 ADAMTSL4Q6UY14 1074 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 CMC1Q7Z7K0 106 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 SLC41A1Q8IVJ1 513 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 PNPLA1Q8N8W4 532 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 BANPQ8N9N5 519 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 DENND6BQ8NEG7 585 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 APOPT1Q96IL0 206 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 NDNQ99608 321 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 IQCGQ9H095 443 aaKnown RBP12.19□□□□□ -0.46
TUBE1-202ENST00000368662 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.19□□□□□ -0.46
TUBE1-202ENST00000368662 DCDC2Q9UHG0 476 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 ANKRD6Q9Y2G4 727 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 LRRK1Q38SD2 2015 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 A0A087X1B8 175 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 A0A096LPK6 155 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 FOXO6A8MYZ6 492 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 E5RI56 91 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 VPS26AO75436 327 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 AP2A2O94973 939 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 PAK4O96013 591 aaPredicted RBP12.19□□□□□ -0.46
TUBE1-202ENST00000368662 SOD1P00441 154 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 GSTA1P08263 222 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 OR56A5P0C7T3 313 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 COL6A2P12110 1019 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 AOC1P19801 751 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 FDXRP22570 491 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 NUDT1P36639 197 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 CSRP3P50461 194 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 TAS2R39P59534 338 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 INSCQ1MX18 579 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 WSCD2Q2TBF2 565 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 PTRHD1Q6GMV3 140 aaKnown RBP12.19□□□□□ -0.46
TUBE1-202ENST00000368662 MACC1Q6ZN28 852 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 TSNARE1Q96NA8 513 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 LENG8Q96PV6 779 aaPredicted RBP12.19□□□□□ -0.46
TUBE1-202ENST00000368662 PANX3Q96QZ0 392 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 KLF6Q99612 283 aaPredicted RBP12.19□□□□□ -0.46
TUBE1-202ENST00000368662 TSSK1BQ9BXA7 367 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 CAB39LQ9H9S4 337 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 KCNK9Q9NPC2 374 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 PCMTD2Q9NV79 361 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 WSB2Q9NYS7 404 aaPredicted RBP12.19□□□□□ -0.46
TUBE1-202ENST00000368662 TMPRSS11EQ9UL52 423 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 CYP8B1Q9UNU6 501 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 ACOT9Q9Y305 439 aa12.19□□□□□ -0.46
TUBE1-202ENST00000368662 GOLGA8RI6L899 631 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 TYROBPO43914 113 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 RHOBTB1O94844 696 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 C2P06681 752 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 ATP1B2P14415 290 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-202ENST00000368662 CRHR1P34998 444 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 CCR5P51681 352 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 PDAP1Q13442 181 aaKnown RBP12.18□□□□□ -0.46
TUBE1-202ENST00000368662 PDE1CQ14123 709 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-202ENST00000368662 CTSL3PQ5NE16 218 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 CWF19L1Q69YN2 538 aaKnown RBP12.18□□□□□ -0.46
TUBE1-202ENST00000368662 KDM7AQ6ZMT4 941 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 TP53I13Q8NBR0 393 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-202ENST00000368662 ACVR1CQ8NER5 493 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 CENPTQ96BT3 561 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 HIC2Q96JB3 615 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 SELENOSQ9BQE4 189 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 BOCQ9BWV1 1114 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 VPS11Q9H270 941 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 SYTL2Q9HCH5 934 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 GPAMQ9HCL2 828 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 CD93Q9NPY3 652 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 NKIRAS1Q9NYS0 192 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 DLGAP2Q9P1A6 1054 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 MUC3AQ02505 3323 aa12.18□□□□□ -0.46
TUBE1-202ENST00000368662 TMEM120BA0PK00 339 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 TM9SF1O15321 606 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 LATO43561 262 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 GLRA3O75311 464 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 ZWINTO95229 277 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 PCCBP05166 539 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 SLC35E2BP0CK96 405 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 CREB1P16220 341 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 CHRM3P20309 590 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 CA5AP35218 305 aa12.17□□□□□ -0.46
TUBE1-202ENST00000368662 TRIM23P36406 574 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms