RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 GPR39O43194 453 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 VEGFDO43915 354 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 PPFIA2O75334 1257 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 PTMAP06454 111 aaKnown RBP18.71■□□□□ 0.59
CKS1B-203ENST00000368439 CCDC175P0C221 793 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 ACTN2P35609 894 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 GPR3P46089 330 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 FASLGP48023 281 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 SPARCL1Q14515 664 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 TAF1AQ15573 450 aaPredicted RBP18.71■□□□□ 0.59
CKS1B-203ENST00000368439 OASLQ15646 514 aaKnown RBP18.71■□□□□ 0.59
CKS1B-203ENST00000368439 CHRNA6Q15825 494 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 PARP6Q2NL67 630 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.71■□□□□ 0.59
CKS1B-203ENST00000368439 C11orf96Q7Z7L8 435 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 SLC13A5Q86YT5 568 aaPredicted RBP18.71■□□□□ 0.59
CKS1B-203ENST00000368439 WDR36Q8NI36 951 aaKnown RBP18.71■□□□□ 0.59
CKS1B-203ENST00000368439 SLC37A2Q8TED4 501 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 ATG4AQ8WYN0 398 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 FGF11Q92914 225 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 RTP4Q96DX8 246 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 ZNF578Q96N58 590 aaPredicted RBP18.71■□□□□ 0.59
CKS1B-203ENST00000368439 SLC46A1Q96NT5 459 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 PPP1R2P1Q96PQ5 205 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 TBL1YQ9BQ87 522 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 FOXP3Q9BZS1 431 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 LZTFL1Q9NQ48 299 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.71■□□□□ 0.59
CKS1B-203ENST00000368439 KCTD3Q9Y597 815 aa18.71■□□□□ 0.59
CKS1B-203ENST00000368439 NBEAQ8NFP9 2946 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 TRBV23OR9-2A0A075B6M9 112 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 CCDC187A0A096LP49 1063 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 GLYATL1P3A0A0U1RQE8 302 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 UGT1A9O60656 530 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 UGT1A6P19224 532 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 UGT1A1P22309 533 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 UGT1A4P22310 534 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 CD1CP29017 333 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 UGT1A3P35503 534 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 UGT1A5P35504 534 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 INHBCP55103 352 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 SEL1L2Q5TEA6 688 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 IYDQ6PHW0 289 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 C19orf48Q6RUI8 117 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 FAM151BQ6UXP7 276 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 ZNF574Q6ZN55 896 aaPredicted RBP18.7■□□□□ 0.58
CKS1B-203ENST00000368439 UGT1A7Q9HAW7 530 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 UGT1A10Q9HAW8 530 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 UGT1A8Q9HAW9 530 aa18.7■□□□□ 0.58
CKS1B-203ENST00000368439 ZFYVE26Q68DK2 2539 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 STX7O15400 261 aaKnown RBP18.69■□□□□ 0.58
CKS1B-203ENST00000368439 LIASO43766 372 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 CDK14O94921 469 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 LPOP22079 712 aaPredicted RBP18.69■□□□□ 0.58
CKS1B-203ENST00000368439 ALDH4A1P30038 563 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 ERVPABLB-1P60509 514 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 CFHR1Q03591 330 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 TMEM115Q12893 351 aaPredicted RBP18.69■□□□□ 0.58
CKS1B-203ENST00000368439 SQSTM1Q13501 440 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 RPS6KA1Q15418 735 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 SIX1Q15475 284 aaPredicted RBP18.69■□□□□ 0.58
CKS1B-203ENST00000368439 CRTC3Q6UUV7 619 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 ARHGEF18Q6ZSZ5 1173 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 LRRTM4Q86VH4 590 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 DDHD1Q8NEL9 900 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 BRSK1Q8TDC3 778 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 HNRNPLLQ8WVV9 542 aaKnown RBP18.69■□□□□ 0.58
CKS1B-203ENST00000368439 TMEM74Q96NL1 305 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 TIMM29Q9BSF4 260 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 SEMA6CQ9H3T2 930 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 RDH14Q9HBH5 336 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 EPB41L5Q9HCM4 733 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 KLC4Q9NSK0 619 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 SMOXQ9NWM0 555 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 PKP3Q9Y446 797 aa18.69■□□□□ 0.58
CKS1B-203ENST00000368439 FAM208BQ5VWN6 2430 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 IGHV1OR21-1A0A087WYE8 117 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 C2orf81A6NN90 581 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 CDRT15L2A8MXV6 281 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 TMX2-CTNND1H3BSU7 103 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 KMOO15229 486 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 CPNE6O95741 557 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 F3P13726 295 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 ZNF7P17097 686 aaPredicted RBP18.68■□□□□ 0.58
CKS1B-203ENST00000368439 ITPKBP27987 946 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 ZNF140P52738 457 aaPredicted RBP18.68■□□□□ 0.58
CKS1B-203ENST00000368439 XIAPP98170 497 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 CLPPQ16740 277 aaPredicted RBP18.68■□□□□ 0.58
CKS1B-203ENST00000368439 COL28A1Q2UY09 1125 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 PLA2G4EQ3MJ16 856 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 AMZ1Q400G9 498 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 OR4K2Q8NGD2 314 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 DCBLD2Q96PD2 775 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 C19orf43Q9BQ61 176 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 NUDT22Q9BRQ3 303 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 TLR10Q9BXR5 811 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 FRMD8P1Q9BZ68 369 aaPredicted RBP18.68■□□□□ 0.58
CKS1B-203ENST00000368439 SARS2Q9NP81 518 aaKnown RBP18.68■□□□□ 0.58
CKS1B-203ENST00000368439 PRDM8Q9NQV8 689 aa18.68■□□□□ 0.58
CKS1B-203ENST00000368439 SCHIP1Q9P0W5 487 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms