RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ZNF382Q96SR6 550 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 KCTD14Q9BQ13 255 aaPredicted RBP14.18□□□□□ -0.14
CD48-201ENST00000368045 ADI1Q9BV57 179 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 TTLL2Q9BWV7 592 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 ALG2Q9H553 416 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 SUN2Q9UH99 717 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 TRMT6Q9UJA5 497 aaKnown RBP14.18□□□□□ -0.14
CD48-201ENST00000368045 ANAPC2Q9UJX6 822 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 PHF24Q9UPV7 400 aa14.18□□□□□ -0.14
CD48-201ENST00000368045 A0A1B0GTW7 788 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 TCRBV5S2A0A599 114 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 NPEPPSL1A6NEC2 478 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 IFRD1O00458 451 aaPredicted RBP14.17□□□□□ -0.14
CD48-201ENST00000368045 CLDN11O75508 207 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 HTR1EP28566 365 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 RFC2P35250 354 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 ZFP36L2P47974 494 aaKnown RBP14.17□□□□□ -0.14
CD48-201ENST00000368045 POLR2JP52435 117 aaKnown RBP14.17□□□□□ -0.14
CD48-201ENST00000368045 DIO3P55073 304 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 ADARP55265 1226 aaKnown RBP14.17□□□□□ -0.14
CD48-201ENST00000368045 IL2P60568 153 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 ESRRGP62508 458 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 LIPEQ05469 1076 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 SLC36A3Q495N2 470 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 FAM171A1Q5VUB5 890 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 IL31Q6EBC2 164 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 TTC33Q6PID6 262 aaPredicted RBP14.17□□□□□ -0.14
CD48-201ENST00000368045 LPCAT2Q7L5N7 544 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 GPSM1Q86YR5 675 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 CMTR2Q8IYT2 770 aaKnown RBP14.17□□□□□ -0.14
CD48-201ENST00000368045 DIS3LQ8TF46 1054 aaKnown RBP14.17□□□□□ -0.14
CD48-201ENST00000368045 OSCP1Q8WVF1 389 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 LINC01599Q8WXQ3 324 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 KCNJ9Q92806 393 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 HGH1Q9BTY7 390 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 TDRD1Q9BXT4 1180 aaKnown RBP14.17□□□□□ -0.14
CD48-201ENST00000368045 YTHDF1Q9BYJ9 559 aaKnown RBP14.17□□□□□ -0.14
CD48-201ENST00000368045 SCUBE2Q9NQ36 999 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 TRMT13Q9NUP7 481 aaKnown RBP14.17□□□□□ -0.14
CD48-201ENST00000368045 SMOXQ9NWM0 555 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 CIDEBQ9UHD4 219 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 EGFL7Q9UHF1 273 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 DNMT3LQ9UJW3 386 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 IKZF3Q9UKT9 509 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 FAM50BQ9Y247 325 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 A0A0D9SEW6 157 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 RNF103-CHMP3A0A140T963 221 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 ILVBLA1L0T0 632 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 ASPDHA6ND91 283 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 PLOD2O00469 737 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 SNAP91O60641 907 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 TSPAN12O95859 305 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 ENO2P09104 434 aaPredicted RBP14.17□□□□□ -0.14
CD48-201ENST00000368045 PRSS56P0CW18 603 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 CRHR2Q13324 411 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 RBBP7Q16576 425 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 CYP51A1Q16850 503 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 FAM219BQ5XKK7 198 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 UGT3A1Q6NUS8 523 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 LEMD2Q8NC56 503 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 OR7D4Q8NG98 312 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 SEPT5Q99719 369 aaPredicted RBP14.17□□□□□ -0.14
CD48-201ENST00000368045 ADGRE3Q9BY15 652 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 CCSER2Q9H7U1 834 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 HEBP1Q9NRV9 189 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 TMEM161AQ9NX61 479 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 NUDT4Q9NZJ9 180 aa14.17□□□□□ -0.14
CD48-201ENST00000368045 ANKRD36A6QL64 1941 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 A0A1B0GTL3 188 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 GOLGA8CPA6NN73 597 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 H3BNC9 293 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 H7C0S8 307 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 H7C4K7 107 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 INPP4BO15327 924 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 PRLP01236 227 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 ESR1P03372 595 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 CKBP12277 381 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 TTKP33981 857 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 EMX2Q04743 252 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 ZBED5Q49AG3 693 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 CHST9Q7L1S5 443 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 STK40Q8N2I9 435 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 DPP10Q8N608 796 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 MDGA1Q8NFP4 955 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 B4GALNT2Q8NHY0 566 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 LZICQ8WZA0 190 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 EZH1Q92800 747 aaPredicted RBP14.16□□□□□ -0.14
CD48-201ENST00000368045 UPF1Q92900 1129 aaKnown RBP eCLIP14.16□□□□□ -0.14
CD48-201ENST00000368045 PDLIM5Q96HC4 596 aaKnown RBP14.16□□□□□ -0.14
CD48-201ENST00000368045 ZNF512Q96ME7 567 aaPredicted RBP14.16□□□□□ -0.14
CD48-201ENST00000368045 SPON2Q9BUD6 331 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 DDX18Q9NVP1 670 aaKnown RBP14.16□□□□□ -0.14
CD48-201ENST00000368045 ZNF639Q9UID6 485 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 AGO1Q9UL18 857 aaKnown RBP14.16□□□□□ -0.14
CD48-201ENST00000368045 SLC27A5Q9Y2P5 690 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 TIMM22Q9Y584 194 aa14.16□□□□□ -0.14
CD48-201ENST00000368045 SLC38A8A6NNN8 435 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 ACOX3O15254 700 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 TBC1D4O60343 1298 aa14.15□□□□□ -0.14
CD48-201ENST00000368045 LDLRP01130 860 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms