RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 TIE1P35590 1138 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 ARL2P36404 184 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 MLLT3P42568 568 aaPredicted RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 ACLYP53396 1101 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 SLC16A1P53985 500 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 ITGA1P56199 1179 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 POU4F1Q01851 419 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 RHDQ02161 417 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 MAB21L1Q13394 359 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 PRAMEF19Q5SWL8 479 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 FAM117BQ6P1L5 589 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 ZNF773Q6PK81 442 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 PHF13Q86YI8 300 aaPredicted RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 SLC44A2Q8IWA5 706 aaPredicted RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 CPNE9Q8IYJ1 553 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.64□□□□□ -0.553e-8■■■■■ 70.6
PRKN-206ENST00000366898 TSPAN17Q96FV3 270 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 FUNDC2Q9BWH2 189 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 STRA6Q9BX79 667 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 HAPLN2Q9GZV7 340 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 SSU72Q9NP77 194 aaKnown RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 TIMM13Q9Y5L4 95 aaPredicted RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 MAFBQ9Y5Q3 323 aaPredicted RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 CCL15-CCL14A0A0B4J2E2 113 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 GPR25O00155 361 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 MYL12BO14950 172 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 TSPAN3O60637 253 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 GLDCP23378 1020 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 ARF5P84085 180 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 SNAPC2Q13487 334 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 CCL15Q16663 113 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 HSD17B12Q53GQ0 312 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 CELF3Q5SZQ8 465 aaKnown RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 RBM20Q5T481 1227 aaKnown RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 MAP1SQ66K74 1059 aaPredicted RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 TBC1D15Q8TC07 691 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 NCSTNQ92542 709 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 MYDGFQ969H8 173 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 SH3YL1Q96HL8 342 aaPredicted RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 PPM1MQ96MI6 270 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 SLC29A1Q99808 456 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 CTRCQ99895 268 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 LPIN3Q9BQK8 851 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 NEURL2Q9BR09 285 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 SLC22A4Q9H015 551 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 MINDY3Q9H8M7 445 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 SNX15Q9NRS6 342 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 NR2E3Q9Y5X4 410 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 CLCA3PQ9Y6N3 262 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 hCG_1818297A0A087WSY0 165 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 KATNA1O75449 491 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 ERN1O75460 977 aaKnown RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 IL18RAPO95256 599 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 CHRNGP07510 517 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 TGFB3P10600 412 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 HGFP14210 728 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 TNNI3P19429 210 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 CYP2B6P20813 491 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 KDELR1P24390 212 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 FGFBP1Q14512 234 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 SMCO1Q147U7 214 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 TSNQ15631 228 aaKnown RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 TSC22D1Q15714 1073 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 CLPPQ16740 277 aaPredicted RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 RNASEH2BQ5TBB1 312 aaKnown RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 ANKRD26P1Q6NSI1 321 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 IKBIPQ70UQ0 350 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 GPRC5AQ8NFJ5 357 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 BTN2A2Q8WVV5 523 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 REXO5Q96IC2 774 aaKnown RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 CNPPD1Q9BV87 410 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 DPCDQ9BVM2 203 aaPredicted RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 CCNB1IP1Q9NPC3 277 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 ERVK13-1Q9NX77 482 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 COL5A3P25940 1745 aaPredicted RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 SNAP29O95721 258 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 HMGCRP04035 888 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 MPOP05164 745 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 DCDC1P59894 354 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 OGDHQ02218 1023 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 UGT8Q16880 541 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 BOLA3Q53S33 107 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 GRTP1Q5TC63 336 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 TRMT10BQ6PF06 316 aaKnown RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 GCNT7Q6ZNI0 430 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 CNTD1Q8N815 330 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 SLC37A3Q8NCC5 494 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 ST8SIA2Q92186 375 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 GTF2H4Q92759 462 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 FBXL18Q96ME1 805 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 AAASQ9NRG9 546 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 PCDHB16Q9NRJ7 776 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 SLC38A7Q9NVC3 462 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 XPR1Q9UBH6 696 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 CLEC4AQ9UMR7 237 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 BTRCQ9Y297 605 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 TESMINQ9Y4I5 508 aa11.64□□□□□ -0.55
PRKN-206ENST00000366898 DNMT3AQ9Y6K1 912 aaPredicted RBP11.64□□□□□ -0.55
PRKN-206ENST00000366898 A0A0J9YYE9 177 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms