RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 PCDHGB1Q9Y5G3 927 aa16.64■□□□□ 0.26
NID1-202ENST00000366595 FKBP7Q9Y680 259 aa16.64■□□□□ 0.26
NID1-202ENST00000366595 MOXD2PA6NHM9 499 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 L7N2F9 121 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 KDM4BO94953 1096 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 TPSB2P20231 275 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 ERP29P30040 261 aaKnown RBP16.64■□□□□ 0.25
NID1-202ENST00000366595 VAMP2P63027 116 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 TPSAB1Q15661 275 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 ATP13A4Q4VNC1 1196 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 ZC3H12AQ5D1E8 599 aaKnown RBP16.64■□□□□ 0.25
NID1-202ENST00000366595 PRAMEF17Q5VTA0 474 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 FAM35AQ86V20 835 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 UBR7Q8N806 425 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 RASGEF1AQ8N9B8 481 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 ZNF347Q96SE7 839 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 DPPA5A6NC42 116 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 KAT7O95251 611 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 AMHP03971 560 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 ACAP2Q15057 778 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 C15orf59Q2T9L4 293 aaPredicted RBP16.64■□□□□ 0.25
NID1-202ENST00000366595 LDLRAP1Q5SW96 308 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 RNASEH2BQ5TBB1 312 aaKnown RBP16.64■□□□□ 0.25
NID1-202ENST00000366595 UBE2R2Q712K3 238 aaPredicted RBP16.64■□□□□ 0.25
NID1-202ENST00000366595 ACER1Q8TDN7 264 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 TCF25Q9BQ70 676 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 NUDT4Q9NZJ9 180 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 ZNF490Q9ULM2 529 aaPredicted RBP16.64■□□□□ 0.25
NID1-202ENST00000366595 PTCH2Q9Y6C5 1203 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 USP31Q70CQ4 1352 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 ASGR1P07306 291 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 USP4Q13107 963 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 BRMS1LQ5PSV4 323 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 RAP1GAP2Q684P5 730 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 SDR16C5Q8N3Y7 309 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 ASF1AQ9Y294 204 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 GPSM3Q9Y4H4 160 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 KIF1BO60333 1816 aa16.64■□□□□ 0.25
NID1-202ENST00000366595 ATP6V1G1O75348 118 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 C22orf31O95567 290 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 OR3A3P47888 321 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 OR3A2P47893 321 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 KCTD8Q6ZWB6 473 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 GALNT7Q86SF2 657 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 MCEMP1Q8IX19 187 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 RPL36Q9Y3U8 105 aaKnown RBP16.63■□□□□ 0.25
NID1-202ENST00000366595 SHROOM2Q13796 1616 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 TBC1D3BA6NDS4 549 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 NOL4O94818 638 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 IFNA21P01568 189 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 TSPAN8P19075 237 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 ARL3P36405 182 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 BTG3Q14201 252 aaPredicted RBP16.63■□□□□ 0.25
NID1-202ENST00000366595 NTRK3Q16288 839 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 CNDP2Q96KP4 475 aaKnown RBP16.63■□□□□ 0.25
NID1-202ENST00000366595 NMUR2Q9GZQ4 415 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 ALG2Q9H553 416 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 MRPL17Q9NRX2 175 aaKnown RBP16.63■□□□□ 0.25
NID1-202ENST00000366595 TMEM5Q9Y2B1 443 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 A8MX80 341 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 PVALBP20472 110 aaPredicted RBP16.63■□□□□ 0.25
NID1-202ENST00000366595 CCNCP24863 283 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 DCKP27707 260 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 CBX2Q14781 532 aaPredicted RBP16.63■□□□□ 0.25
NID1-202ENST00000366595 FAM76BQ5HYJ3 339 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 FOXR2Q6PJQ5 311 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 MND1Q9BWT6 205 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 LGR4Q9BXB1 951 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 AGO1Q9UL18 857 aaKnown RBP16.63■□□□□ 0.25
NID1-202ENST00000366595 INO80Q9ULG1 1556 aaPredicted RBP16.63■□□□□ 0.25
NID1-202ENST00000366595 M0QX08 132 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 DCLK1O15075 740 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 FSHRP23945 695 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 DLG2Q15700 870 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 ABCA11PQ4W5N1 156 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 HDAC10Q969S8 669 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 FERD3LQ96RJ6 166 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 MAP10Q9P2G4 905 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 PCDHGB5Q9Y5G0 923 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 LRRC7Q96NW7 1537 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 A0A1W2PQ67 120 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 PRPS2P11908 318 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 MC4RP32245 332 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 SLC5A3P53794 718 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 NDUFA9Q16795 377 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 CRTC2Q53ET0 693 aaPredicted RBP16.63■□□□□ 0.25
NID1-202ENST00000366595 LINGO2Q7L985 606 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 GRIN3AQ8TCU5 1115 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 PGLYRP2Q96PD5 576 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 BLOC1S4Q9NUP1 217 aa16.63■□□□□ 0.25
NID1-202ENST00000366595 C5orf51A6NDU8 294 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 ZNF132P52740 706 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 PM20D2Q8IYS1 436 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 CMTR2Q8IYT2 770 aaKnown RBP16.62■□□□□ 0.25
NID1-202ENST00000366595 DNAJB3Q8WWF6 145 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 MFSD14AQ96MC6 490 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 NSMCE3Q96MG7 304 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 TAPBPLQ9BX59 468 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 ANKHQ9HCJ1 492 aa16.62■□□□□ 0.25
NID1-202ENST00000366595 TLL2Q9Y6L7 1015 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms