RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 PELI3Q8N2H9 469 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 TTC16Q8NEE8 873 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 ARNT2Q9HBZ2 717 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 MRM3Q9HC36 420 aaKnown RBP16.08■□□□□ 0.16
IFT140-201ENST00000361339 POLR3BQ9NW08 1133 aaPredicted RBP16.08■□□□□ 0.16
IFT140-201ENST00000361339 GALPQ9UBC7 116 aa16.08■□□□□ 0.16
IFT140-201ENST00000361339 TSR3Q9UJK0 312 aaKnown RBP16.08■□□□□ 0.16
IFT140-201ENST00000361339 ZBBXA8MT70 800 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 UBXN8O00124 270 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 EI24O14681 340 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 MYCP01106 439 aaPredicted RBP16.07■□□□□ 0.16
IFT140-201ENST00000361339 CCNA2P20248 432 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 JAK1P23458 1154 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 DNAJB2P25686 324 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 PCYT1AP49585 367 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 TNK2Q07912 1038 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 CAPRIN1Q14444 709 aaKnown RBP16.07■□□□□ 0.16
IFT140-201ENST00000361339 OR4D1Q15615 310 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 REP15Q6BDI9 236 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 PIWIL4Q7Z3Z4 852 aaKnown RBP16.07■□□□□ 0.16
IFT140-201ENST00000361339 C17orf50Q8WW18 174 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 ESAMQ96AP7 390 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 MAELQ96JY0 434 aaKnown RBP16.07■□□□□ 0.16
IFT140-201ENST00000361339 TRIM62Q9BVG3 475 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 ADNPQ9H2P0 1102 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 SPO11Q9Y5K1 396 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 WASH4PA8MWX3 477 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 MRASO14807 208 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 SLC7A1P30825 629 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 LSM3P62310 102 aaKnown RBP16.07■□□□□ 0.16
IFT140-201ENST00000361339 MSANTD2Q6P1R3 559 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 DCP1BQ8IZD4 617 aaKnown RBP16.07■□□□□ 0.16
IFT140-201ENST00000361339 LGI2Q8N0V4 545 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 PDZD8Q8NEN9 1154 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 PTCD2Q8WV60 388 aaKnown RBP16.07■□□□□ 0.16
IFT140-201ENST00000361339 FAM193BQ96PV7 902 aaPredicted RBP16.07■□□□□ 0.16
IFT140-201ENST00000361339 TCF12Q99081 682 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 SPON2Q9BUD6 331 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 DGCR6LQ9BY27 220 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 FAM50BQ9Y247 325 aa16.07■□□□□ 0.16
IFT140-201ENST00000361339 NPHS1O60500 1241 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 TCEA1P23193 301 aaKnown RBP16.06■□□□□ 0.16
IFT140-201ENST00000361339 SERINC3Q13530 473 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 SF3B4Q15427 424 aaKnown RBP eCLIP16.06■□□□□ 0.164e-9■■■■■ 31.8
IFT140-201ENST00000361339 MOGQ16653 247 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 AGAP9Q5VTM2 703 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 CHPT1Q8WUD6 406 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 BCL7CQ8WUZ0 217 aaPredicted RBP16.06■□□□□ 0.16
IFT140-201ENST00000361339 PRKD2Q9BZL6 878 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 CACNA2D2Q9NY47 1150 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.06■□□□□ 0.16
IFT140-201ENST00000361339 VTI1BQ9UEU0 232 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 GREB1Q4ZG55 1949 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 MTMR11A4FU01 709 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 GJB5O95377 273 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 ALDOCP09972 364 aaKnown RBP16.06■□□□□ 0.16
IFT140-201ENST00000361339 PAX3P23760 479 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 SH3BP2P78314 561 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 CREB5Q02930 508 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 KCNJ8Q15842 424 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 UNC50Q53HI1 259 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 EPHX4Q8IUS5 362 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 WBP2Q969T9 261 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 BTN2A3PQ96KV6 586 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 C8orf48Q96LL4 319 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 CNOT11Q9UKZ1 510 aaKnown RBP16.06■□□□□ 0.16
IFT140-201ENST00000361339 ERGIC3Q9Y282 383 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 TMED5Q9Y3A6 229 aa16.06■□□□□ 0.16
IFT140-201ENST00000361339 PDE4DIPQ5VU43 2346 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 DLGAP1O14490 977 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 CA12O43570 354 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 TLR5O60602 858 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 SULT1C4O75897 302 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 MTHFD1P11586 935 aaKnown RBP16.05■□□□□ 0.16
IFT140-201ENST00000361339 OPRL1P41146 370 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 CLCN5P51795 746 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 DSG4Q86SJ6 1040 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 DCBLD1Q8N8Z6 715 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 SPAG4Q9NPE6 437 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 MARCH5Q9NX47 278 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 ABT1Q9ULW3 272 aaKnown RBP16.05■□□□□ 0.16
IFT140-201ENST00000361339 BTRCQ9Y297 605 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 IGLV3-10A0A075B6K4 115 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 UBA6A0AVT1 1052 aaPredicted RBP16.05■□□□□ 0.16
IFT140-201ENST00000361339 NCF1BA6NI72 391 aaPredicted RBP16.05■□□□□ 0.16
IFT140-201ENST00000361339 NCF1CA8MVU1 366 aaPredicted RBP16.05■□□□□ 0.16
IFT140-201ENST00000361339 SNAP29O95721 258 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 NCF1P14598 390 aaPredicted RBP16.05■□□□□ 0.16
IFT140-201ENST00000361339 CHRM3P20309 590 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 ALDH4A1P30038 563 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 OXTRP30559 389 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 PFKFB4Q16877 469 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 PPP4R4Q6NUP7 873 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 CADM3Q8N126 398 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 SCAIQ8N9R8 606 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 SEPHS2Q99611 448 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 SLC30A3Q99726 388 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 UNC93B1Q9H1C4 597 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 FBXO44Q9H4M3 255 aa16.05■□□□□ 0.16
IFT140-201ENST00000361339 GKN1Q9NS71 199 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms