RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SPDL1Q96EA4 605 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 OR52B2Q96RD2 323 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 TMEM209Q96SK2 561 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 SLC39A8Q9C0K1 460 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 ILKAPQ9H0C8 392 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 MRM3Q9HC36 420 aaKnown RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 GLOD4Q9HC38 313 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 CPSF2Q9P2I0 782 aaKnown RBP7.33□□□□□ -1.24
CLCN3-202ENST00000360642 MID2Q9UJV3 735 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 RAP2CQ9Y3L5 183 aa7.33□□□□□ -1.24
CLCN3-202ENST00000360642 DFFAO00273 331 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 ANXA9O76027 345 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 B3GAT3O94766 335 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 SORBS2O94875 1100 aaKnown RBP7.32□□□□□ -1.24
CLCN3-202ENST00000360642 EFEMP2O95967 443 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 CHRNGP07510 517 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 COX4I1P13073 169 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 NCF2P19878 526 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-202ENST00000360642 MAPK9P45984 424 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 BRCC3P46736 316 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 PGFP49763 221 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 TUBP50607 506 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 SLC12A1Q13621 1099 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 CCNIQ14094 377 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 TOMM20Q15388 145 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 RWDD4Q6NW29 188 aaKnown RBP7.32□□□□□ -1.24
CLCN3-202ENST00000360642 METTL23Q86XA0 190 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 SLC25A41Q8N5S1 370 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 LZTR1Q8N653 840 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 ZNF655Q8N720 491 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-202ENST00000360642 MOCOSQ96EN8 888 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 RTKNQ9BST9 563 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 SMOC2Q9H3U7 446 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 ZNF385DQ9H6B1 395 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 TASP1Q9H6P5 420 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 ABCC13Q9NSE7 274 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 TREX1Q9NSU2 369 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 UCKL1Q9NWZ5 548 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 TLK1Q9UKI8 766 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 DSEQ9UL01 958 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 MKI67P46013 3256 aaKnown RBP7.32□□□□□ -1.24
CLCN3-202ENST00000360642 A0A0U1RQF3 1178 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 CCDC154A6NI56 674 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 KCNU1A8MYU2 1149 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 PHGDHO43175 533 aaKnown RBP7.32□□□□□ -1.24
CLCN3-202ENST00000360642 GRID2O43424 1007 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 SKAP2O75563 359 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-202ENST00000360642 POMCP01189 267 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 NTRK1P04629 796 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 RPL14P50914 215 aaKnown RBP7.32□□□□□ -1.24
CLCN3-202ENST00000360642 PGGT1BP53609 377 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 MAPK10P53779 464 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 NKX3-2P78367 333 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 LSAMPQ13449 338 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 USP10Q14694 798 aaKnown RBP7.32□□□□□ -1.24
CLCN3-202ENST00000360642 CCDC157Q569K6 752 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 CST9Q5W186 159 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 CXCL17Q6UXB2 119 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 RANBP10Q6VN20 620 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 CEP97Q8IW35 865 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 LSMEM2Q8N112 164 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 FBXW8Q8N3Y1 598 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 FSTL5Q8N475 847 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-202ENST00000360642 ATPAF2Q8N5M1 289 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 CPSF7Q8N684 471 aaKnown RBP7.32□□□□□ -1.24
CLCN3-202ENST00000360642 SOCS4Q8WXH5 440 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 RSPH1Q8WYR4 309 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 TCF7L2Q9NQB0 619 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 ACSS2Q9NR19 701 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 NDE1Q9NXR1 346 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-202ENST00000360642 POMPQ9Y244 141 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 GPR45Q9Y5Y3 372 aa7.32□□□□□ -1.24
CLCN3-202ENST00000360642 LOC100653049A0A140TA62 436 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 E9PBE3 544 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 HDAC3O15379 428 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 KLHL41O60662 606 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 KRT34O76011 436 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 DDHD2O94830 711 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 UBXN7O94888 489 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 PCDH8O95206 1070 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 CD1EP15812 388 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 TFEBP19484 476 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 ENPP1P22413 925 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 CCR1P32246 355 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 THBS2P35442 1172 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 MTTPP55157 894 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 NSUN2Q08J23 767 aaKnown RBP eCLIP7.31□□□□□ -1.24
CLCN3-202ENST00000360642 HNRNPDQ14103 355 aaKnown RBP7.31□□□□□ -1.24
CLCN3-202ENST00000360642 MAPRE1Q15691 268 aaKnown RBP7.31□□□□□ -1.24
CLCN3-202ENST00000360642 GSTA3Q16772 222 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 UGP2Q16851 508 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 PAN2Q504Q3 1202 aaKnown RBP7.31□□□□□ -1.24
CLCN3-202ENST00000360642 ARL13AQ5H913 290 aaPredicted RBP7.31□□□□□ -1.24
CLCN3-202ENST00000360642 CFAP157Q5JU67 520 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 OR52E8Q6IFG1 317 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 LRRC8EQ6NSJ5 796 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 TMEM154Q6P9G4 183 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 RAPH1Q70E73 1250 aa7.31□□□□□ -1.24
CLCN3-202ENST00000360642 CHST15Q7LFX5 561 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms