RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 UQCRHP07919 91 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 MYCLP1P12525 358 aaPredicted RBP12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 CD38P28907 300 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 PMLP29590 882 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 PPARGP37231 505 aaPredicted RBP12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 RABIFP47224 123 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 LEPRP48357 1165 aaKnown RBP12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 OVGP1Q12889 678 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 CTBP1Q13363 440 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 ITIH4Q14624 930 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 KHDC1Q4VXA5 237 aaKnown RBP12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 PEAR1Q5VY43 1037 aaPredicted RBP12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 ZNF470Q6ECI4 717 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 ERMP1Q7Z2K6 904 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 GALNT7Q86SF2 657 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 PHYKPLQ8IUZ5 450 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 DCLK2Q8N568 766 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 HEXDCQ8WVB3 486 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 UBLCP1Q8WVY7 318 aaPredicted RBP12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 CDKL2Q92772 493 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 KLHDC7BQ96G42 594 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 LOXL4Q96JB6 756 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 CYTH2Q99418 400 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 COPS8Q99627 209 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 AASDHPPTQ9NRN7 309 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 ZFATQ9P243 1243 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 OAS3Q9Y6K5 1087 aaKnown RBP12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 BPTFQ12830 3046 aa12.28□□□□□ -0.44
NIF3L1-201ENST00000359683 TNRC6BQ9UPQ9 1833 aaKnown RBP12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 CACNB4O00305 520 aaPredicted RBP12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 NDUFS3O75489 264 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 PIAS1O75925 651 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 AHSGP02765 367 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 GABRB3P28472 473 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 DPP6P42658 865 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 SLC1A2P43004 574 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 KIAA1024LP59773 190 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 B4GALNT1Q00973 533 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 TMEM115Q12893 351 aaPredicted RBP12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 NAB1Q13506 487 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 NFATC4Q14934 902 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 PACS1Q6VY07 963 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 PRR23BQ6ZRT6 265 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 MARK2Q7KZI7 788 aaKnown RBP12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 ADGRG6Q86SQ4 1221 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 SLC26A11Q86WA9 606 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 DCP2Q8IU60 420 aaKnown RBP12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 OTUD6BQ8N6M0 293 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 SUMF1Q8NBK3 374 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 OR13H1Q8NG92 308 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 UHMK1Q8TAS1 419 aaKnown RBP12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 GDAP1Q8TB36 358 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 ARFGAP3Q9NP61 516 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 TMEM74BQ9NUR3 256 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 INTS10Q9NVR2 710 aaKnown RBP12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 NSMCE4AQ9NXX6 385 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 VPS18Q9P253 973 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 SLC17A6Q9P2U8 582 aa12.27□□□□□ -0.44
NIF3L1-201ENST00000359683 DCHS1Q96JQ0 3298 aa12.27□□□□□ -0.45
NIF3L1-201ENST00000359683 GPR179Q6PRD1 2367 aa12.27□□□□□ -0.45
NIF3L1-201ENST00000359683 A0A1B0GTW7 788 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 PRR5-ARHGAP8B1AHC4 643 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 TLR4O00206 839 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 VILLO15195 856 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 PFDN6O15212 129 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 VEGFDO43915 354 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 OR1I1O60431 355 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 HAUS5O94927 633 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 THEGLP0DJG4 465 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 GNSP15586 552 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 HOXD12P35452 270 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 NSG1P42857 185 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 ADARP55265 1226 aaKnown RBP12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 MPP1Q00013 466 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 KLHL38Q2WGJ6 581 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 ZNF789Q5FWF6 425 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 TPRG1LQ5T0D9 272 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 ZNF648Q5T619 568 aaPredicted RBP12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 RNF187Q5TA31 235 aaPredicted RBP12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 TRIM74Q86UV6 250 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 LRRC6Q86X45 466 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 SYT12Q8IV01 421 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 RBFAQ8N0V3 343 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 PPM1NQ8N819 430 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 LPGAT1Q92604 370 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 CCDC97Q96F63 343 aaPredicted RBP12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 SCARF2Q96GP6 870 aaPredicted RBP12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 MCMBPQ9BTE3 642 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 BOCQ9BWV1 1114 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 ATXN10Q9UBB4 475 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 NCDNQ9UBB6 729 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 SUSD2Q9UGT4 822 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 VPS9D1Q9Y2B5 631 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 SLC17A4Q9Y2C5 497 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 TMEM98Q9Y2Y6 226 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 PSAT1Q9Y617 370 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 ZNF292O60281 2723 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 SPTY2D1-AS1A0A0U1RR47 76 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 TMEM202A6NGA9 273 aa12.26□□□□□ -0.45
NIF3L1-201ENST00000359683 CFAP99D6REC4 459 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms