RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 SETDB1Q15047 1291 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 PTRHD1Q6GMV3 140 aaKnown RBP13.38□□□□□ -0.27
CCDC197-201ENST00000359253 ZNF765Q7L2R6 523 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 TRPM8Q7Z2W7 1104 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 CYP2U1Q7Z449 544 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 ISCA2Q86U28 154 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 TSPAN33Q86UF1 283 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 HOMEZQ8IX15 550 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 TRAM1L1Q8N609 369 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 GPR26Q8NDV2 337 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 PIP4K2CQ8TBX8 421 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 C10orf82Q8WW14 230 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 STON2Q8WXE9 905 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 INPP5DQ92835 1189 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 KIAA1191Q96A73 305 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 CNDP1Q96KN2 507 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 PANX3Q96QZ0 392 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 COPS8Q99627 209 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 TRMOQ9BU70 441 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 ZSCAN5AQ9BUG6 496 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 HDAC8Q9BY41 377 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 DRC3Q9H069 523 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 FAM83DQ9H4H8 585 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 EPHX3Q9H6B9 360 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 PCDH12Q9NPG4 1184 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 NCKIPSDQ9NZQ3 722 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 CPSF2Q9P2I0 782 aaKnown RBP13.38□□□□□ -0.27
CCDC197-201ENST00000359253 DHRS7Q9Y394 339 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 MUC3AQ02505 3323 aa13.38□□□□□ -0.27
CCDC197-201ENST00000359253 IGLV3-16A0A075B6K0 115 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 CFAP99D6REC4 459 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 TK2O00142 265 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 KPNA3O00505 521 aaPredicted RBP13.37□□□□□ -0.27
CCDC197-201ENST00000359253 KPNA5O15131 536 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 NARSO43776 548 aaKnown RBP13.37□□□□□ -0.27
CCDC197-201ENST00000359253 MAGEC1O60732 1142 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 RNASEH1O60930 286 aaKnown RBP13.37□□□□□ -0.27
CCDC197-201ENST00000359253 IPO13O94829 963 aaKnown RBP13.37□□□□□ -0.27
CCDC197-201ENST00000359253 AP2A2O94973 939 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 F7P08709 466 aaPredicted RBP13.37□□□□□ -0.27
CCDC197-201ENST00000359253 SBK3P0C264 359 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 TFEBP19484 476 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 CHRM3P20309 590 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 MMP12P39900 470 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 GLRBP48167 497 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 RGS4P49798 205 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 CDKN1CP49918 316 aaPredicted RBP13.37□□□□□ -0.27
CCDC197-201ENST00000359253 ARFIP2P53365 341 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 CREB5Q02930 508 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 ZNF460Q14592 562 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 PTPRRQ15256 657 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 ZNF284Q2VY69 593 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 TTLL9Q3SXZ7 439 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 CTSL3PQ5NE16 218 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 FBXL19Q6PCT2 694 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 FOXR1Q6PIV2 292 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 TRMT11Q7Z4G4 463 aaKnown RBP13.37□□□□□ -0.27
CCDC197-201ENST00000359253 RAB44Q7Z6P3 723 aaPredicted RBP13.37□□□□□ -0.27
CCDC197-201ENST00000359253 FAM129BQ96TA1 746 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 P2RY13Q9BPV8 354 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 TUBB6Q9BUF5 446 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 OSBPL6Q9BZF3 934 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 EML4Q9HC35 981 aaKnown RBP13.37□□□□□ -0.27
CCDC197-201ENST00000359253 HAO1Q9UJM8 370 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 FBXL21Q9UKT6 434 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 MRPS17Q9Y2R5 130 aaKnown RBP13.37□□□□□ -0.27
CCDC197-201ENST00000359253 MED16Q9Y2X0 877 aa13.37□□□□□ -0.27
CCDC197-201ENST00000359253 MUC22E2RYF6 1773 aaPredicted RBP13.36□□□□□ -0.27
CCDC197-201ENST00000359253 TMEM221A6NGB7 291 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 PRR33A8MZF0 331 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 M0R296 226 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 DLX3O60479 287 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 HSPA4LO95757 839 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 OR56A5P0C7T3 313 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 ELFN1P0C7U0 828 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 PRSS56P0CW18 603 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 CBSLP0DN79 551 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 CBSP35520 551 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 PRKAA1Q13131 559 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 RCN2Q14257 317 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 TMEM52BQ4KMG9 183 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 LACTB2Q53H82 288 aaPredicted RBP13.36□□□□□ -0.27
CCDC197-201ENST00000359253 LDLRAP1Q5SW96 308 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 SDE2Q6IQ49 451 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 PAQR3Q6TCH7 311 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 TMEM207Q6UWW9 146 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 LIPIQ6XZB0 460 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 TECPR1Q7Z6L1 1165 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 RALGPS2Q86X27 583 aaPredicted RBP13.36□□□□□ -0.27
CCDC197-201ENST00000359253 ANKRD49Q8WVL7 239 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 CCT6BQ92526 530 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 LRRC37BQ96QE4 947 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 VPS35Q96QK1 796 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 GPR21Q99679 349 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 GATA5Q9BWX5 397 aaPredicted RBP13.36□□□□□ -0.27
CCDC197-201ENST00000359253 ILKAPQ9H0C8 392 aaPredicted RBP13.36□□□□□ -0.27
CCDC197-201ENST00000359253 WWP1Q9H0M0 922 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 ACTR5Q9H9F9 607 aaPredicted RBP13.36□□□□□ -0.27
CCDC197-201ENST00000359253 NPHS2Q9NP85 383 aa13.36□□□□□ -0.27
CCDC197-201ENST00000359253 SPATS2LQ9NUQ6 558 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms