RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 COL6A2P12110 1019 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 ITGB6P18564 788 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 TFEBP19484 476 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 PTPRNQ16849 979 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 SETMARQ53H47 684 aaPredicted RBP12.56□□□□□ -0.4
GGPS1-202ENST00000358966 ARL13AQ5H913 290 aaPredicted RBP12.56□□□□□ -0.4
GGPS1-202ENST00000358966 MPP7Q5T2T1 576 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 ZYG11AQ6WRX3 759 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 NRG4Q8WWG1 115 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 POMKQ9H5K3 350 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 FCHO1O14526 889 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 CRABP2P29373 138 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 UBE3AQ05086 875 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 BCL2A1Q16548 175 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 TECRLQ5HYJ1 363 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 RARS2Q5T160 578 aaKnown RBP12.56□□□□□ -0.4
GGPS1-202ENST00000358966 PAQR3Q6TCH7 311 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 CLDN19Q8N6F1 224 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 OR6Y1Q8NGX8 325 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 PPP4R1Q8TF05 950 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 LPGAT1Q92604 370 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 PRELID1Q9Y255 219 aa12.56□□□□□ -0.4
GGPS1-202ENST00000358966 DCTN3O75935 186 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 SRP72O76094 671 aaKnown RBP12.55□□□□□ -0.4
GGPS1-202ENST00000358966 TGDSO95455 350 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 IGSF6O95976 241 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 INAQ16352 499 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 TMEM259Q4ZIN3 620 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 AFTPHQ6ULP2 937 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 SIDT2Q8NBJ9 832 aaKnown RBP12.55□□□□□ -0.4
GGPS1-202ENST00000358966 FBXO27Q8NI29 283 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 HSPBAP1Q96EW2 488 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 BIRC8Q96P09 236 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 GPR21Q99679 349 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 DRC3Q9H069 523 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 MRPL46Q9H2W6 279 aaKnown RBP12.55□□□□□ -0.4
GGPS1-202ENST00000358966 DCLRE1BQ9H816 532 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 IL17CQ9P0M4 197 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 CD84Q9UIB8 345 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 ANKRD6Q9Y2G4 727 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 TRIOBPQ9H2D6 2365 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 DOCK8Q8NF50 2099 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 A0A0J9YYE9 177 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 GAPDHSO14556 408 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-202ENST00000358966 NDUFS3O75489 264 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 SERPINB7O75635 380 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 TPPPO94811 219 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 RHOBTB1O94844 696 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 PRAMEF1O95521 474 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 TRBC1P01850 177 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 METAP1P53582 386 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 EMP3P54852 163 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 AP1S1P61966 158 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 XIAPP98170 497 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 ECT2LQ008S8 904 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 TYSND1Q2T9J0 566 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 SLC9B1Q4ZJI4 515 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 FAM78AQ5JUQ0 283 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 LIPMQ5VYY2 423 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 PPP2R2DQ66LE6 453 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 UBXN10Q96LJ8 280 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 DENND2DQ9H6A0 471 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-202ENST00000358966 WDR55Q9H6Y2 383 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-202ENST00000358966 ZFYVE1Q9HBF4 777 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 ZDHHC2Q9UIJ5 367 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 RWDD3Q9Y3V2 267 aa12.55□□□□□ -0.4
GGPS1-202ENST00000358966 TCF20Q9UGU0 1960 aaKnown RBP12.55□□□□□ -0.4
GGPS1-202ENST00000358966 NCF1BA6NI72 391 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 NCF1CA8MVU1 366 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 PPP6CO00743 305 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 SIX3O95343 332 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 CYP17A1P05093 508 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 LTA4HP09960 611 aaKnown RBP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 NCF1P14598 390 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 ZNF37AP17032 561 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 FDXRP22570 491 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 LHCGRP22888 699 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 CCR3P51677 355 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 CYLC2Q14093 348 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 DHCR24Q15392 516 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 OR4D1Q15615 310 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 CTSL3PQ5NE16 218 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 TMEM214Q6NUQ4 689 aaKnown RBP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 ISCA2Q86U28 154 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 NPAS3Q8IXF0 933 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 LSMEM2Q8N112 164 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 SH3GL1Q99961 368 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 AARSD1Q9BTE6 412 aaKnown RBP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 ATP13A3Q9H7F0 1226 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 ATAD3AQ9NVI7 634 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 PKP3Q9Y446 797 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 A8MT66 165 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 E9PBE3 544 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 ZNF195O14628 629 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 KLHL41O60662 606 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 PDE5AO76074 875 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 OXSR1O95747 527 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 HNRNPA1P09651 372 aaKnown RBP eCLIP12.54□□□□□ -0.4
GGPS1-202ENST00000358966 CDK4P11802 303 aa12.54□□□□□ -0.4
GGPS1-202ENST00000358966 SKIV2L2P42285 1042 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms