RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 HM13Q8TCT9 377 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 ESAMQ96AP7 390 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 NSMCE3Q96MG7 304 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 PSKH2Q96QS6 385 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 CYP2S1Q96SQ9 504 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 ACOX2Q99424 681 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 HGH1Q9BTY7 390 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 C9orf16Q9BUW7 83 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 NUSAP1Q9BXS6 441 aaKnown RBP8.52□□□□□ -1.04
RFX3-202ENST00000358730 GPR62Q9BZJ7 368 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 NACA2Q9H009 215 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.52□□□□□ -1.04
RFX3-202ENST00000358730 MAGEH1Q9H213 219 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 SCUBE2Q9NQ36 999 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 SLC52A3Q9NQ40 469 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 EIF2B4Q9UI10 523 aaKnown RBP8.52□□□□□ -1.04
RFX3-202ENST00000358730 TRMT6Q9UJA5 497 aaKnown RBP8.52□□□□□ -1.04
RFX3-202ENST00000358730 PCTPQ9UKL6 214 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 SLC8A2Q9UPR5 921 aa8.52□□□□□ -1.04
RFX3-202ENST00000358730 ZFP37Q9Y6Q3 630 aaPredicted RBP8.52□□□□□ -1.04
RFX3-202ENST00000358730 KLHL33A6NCF5 533 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 MOXD2PA6NHM9 499 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 DLGAP1O14490 977 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 INSIG1O15503 277 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 MLYCDO95822 493 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 PRR35P0CG20 571 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 UROSP10746 265 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 CKBP12277 381 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 NCK1P16333 377 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 UFM1P61960 85 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 RPS24P62847 133 aaKnown RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 TUBA4AP68366 448 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 LIPEQ05469 1076 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 PABPC1LQ4VXU2 614 aaKnown RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 XKR7Q5GH72 579 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 PAGE3Q5JUK9 113 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 PSAPL1Q6NUJ1 521 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 TTC33Q6PID6 262 aaPredicted RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 EFL1Q7Z2Z2 1120 aaKnown RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 PIANPQ8IYJ0 282 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 ALDH16A1Q8IZ83 802 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 EFHBQ8N7U6 833 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 GOLM1Q8NBJ4 401 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 UPF1Q92900 1129 aaKnown RBP eCLIP8.52□□□□□ -1.05
RFX3-202ENST00000358730 LINGO1Q96FE5 620 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 CENPNQ96H22 339 aaPredicted RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 ZBED2Q9BTP6 218 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 TDRD1Q9BXT4 1180 aaKnown RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 SARS2Q9NP81 518 aaKnown RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 CD274Q9NZQ7 290 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 SUN2Q9UH99 717 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 TMCO1Q9UM00 188 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 V9GYQ6 96 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 OR1I1O60431 355 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 ACSL4O60488 711 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 EEDO75530 441 aaKnown RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 SLC22A3O75751 556 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 SEC24DO94855 1032 aaPredicted RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 FCGR1AP12314 374 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 PKMP14618 531 aaKnown RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 CES1P23141 567 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 MC4RP32245 332 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 CCT8P50990 548 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 KPNA1P52294 538 aaPredicted RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 FCGRTP55899 365 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 NKX3-2P78367 333 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 MERTKQ12866 999 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 DUSP4Q13115 394 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 MBTPS1Q14703 1052 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 ATP6AP1Q15904 470 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 ZRANB3Q5FWF4 1079 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 TXNDC11Q6PKC3 985 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 RNF19BQ6ZMZ0 732 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 GPRIN3Q6ZVF9 776 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 GPSM1Q86YR5 675 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 ABI1Q8IZP0 508 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 FNDC5Q8NAU1 212 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 TNIP2Q8NFZ5 429 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 OR56A4Q8NGH8 313 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 OR2T11Q8NH01 316 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 TSPEARQ8WU66 669 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 CYGBQ8WWM9 190 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 RPL10LQ96L21 214 aaKnown RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 TMEM74Q96NL1 305 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 BIRC8Q96P09 236 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 MUC13Q9H3R2 512 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 RRAGCQ9HB90 399 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 TIMMDC1Q9NPL8 285 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 FKBPLQ9UIM3 349 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 TSR3Q9UJK0 312 aaKnown RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 LEF1Q9UJU2 399 aaPredicted RBP8.52□□□□□ -1.05
RFX3-202ENST00000358730 ZNF225Q9UK10 706 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 VPS9D1Q9Y2B5 631 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 ASB1Q9Y576 335 aa8.52□□□□□ -1.05
RFX3-202ENST00000358730 E5RI56 91 aa8.51□□□□□ -1.05
RFX3-202ENST00000358730 EI24O14681 340 aa8.51□□□□□ -1.05
RFX3-202ENST00000358730 TSPAN12O95859 305 aa8.51□□□□□ -1.05
RFX3-202ENST00000358730 C1RP00736 705 aa8.51□□□□□ -1.05
RFX3-202ENST00000358730 MT-ND1P03886 318 aa8.51□□□□□ -1.05
RFX3-202ENST00000358730 LPOP22079 712 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms