RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 C7P10643 843 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 C6P13671 934 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 HOXB2P14652 356 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 COL9A1P20849 921 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 ALDH3A1P30838 453 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 TAS2R38P59533 333 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 B4GALNT1Q00973 533 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 PDAP1Q13442 181 aaKnown RBP16.9■□□□□ 0.3
TPM1-205ENST00000357980 AGAP9Q5VTM2 703 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 CES4AQ5XG92 561 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 CLDN19Q8N6F1 224 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 GIMAP7Q8NHV1 300 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 RDH11Q8TC12 318 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 CD200R1Q8TD46 325 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 FAM3CQ92520 227 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 SLC30A3Q99726 388 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 SLCO1B3Q9NPD5 702 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 XPR1Q9UBH6 696 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 GNPTGQ9UJJ9 305 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 PRSS21Q9Y6M0 314 aa16.9■□□□□ 0.3
TPM1-205ENST00000357980 NEMP1O14524 444 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 NDUFAB1O14561 156 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 VPS26AO75436 327 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 PYGLP06737 847 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 CPA3P15088 417 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 KCNA4P22459 653 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 NSG1P42857 185 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 CLCN7P51798 805 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 KPNA2P52292 529 aaKnown RBP16.89■□□□□ 0.29
TPM1-205ENST00000357980 FBXO43Q4G163 708 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 TECRLQ5HYJ1 363 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 GPRC6AQ5T6X5 926 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 PAQR3Q6TCH7 311 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 MACC1Q6ZN28 852 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 ZNF765Q7L2R6 523 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 C10orf107Q8IVU9 208 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 RAB3IL1Q8TBN0 382 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 ZNF473Q8WTR7 871 aaKnown RBP16.89■□□□□ 0.29
TPM1-205ENST00000357980 FAM131CQ96AQ9 280 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 COPS8Q99627 209 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 MRPL57Q9BQC6 102 aaKnown RBP16.89■□□□□ 0.29
TPM1-205ENST00000357980 UNKQ9C0B0 810 aaKnown RBP16.89■□□□□ 0.29
TPM1-205ENST00000357980 MRPL46Q9H2W6 279 aaKnown RBP16.89■□□□□ 0.29
TPM1-205ENST00000357980 CPSF2Q9P2I0 782 aaKnown RBP16.89■□□□□ 0.29
TPM1-205ENST00000357980 DUSP12Q9UNI6 340 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 COQ6Q9Y2Z9 468 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 IQCF5A8MTL0 148 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 MMP20O60882 483 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 RECQL5O94762 991 aaPredicted RBP16.89■□□□□ 0.29
TPM1-205ENST00000357980 FGF3P11487 239 aaPredicted RBP16.89■□□□□ 0.29
TPM1-205ENST00000357980 SKIV2L2P42285 1042 aaKnown RBP16.89■□□□□ 0.29
TPM1-205ENST00000357980 ACAP2Q15057 778 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 CHI3L2Q15782 390 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 ZNF284Q2VY69 593 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 CPLX4Q7Z7G2 160 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 TRIM42Q8IWZ5 723 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 NAT14Q8WUY8 206 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 AP2M1Q96CW1 435 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 SCYL1Q96KG9 808 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 VPS35Q96QK1 796 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 MID2Q9UJV3 735 aa16.89■□□□□ 0.29
TPM1-205ENST00000357980 TRPM6Q9BX84 2022 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 COL6A3P12111 3177 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 A0A1W2PP55 124 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 E5RI56 91 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 H3BMM5 538 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 EDF1O60869 148 aaKnown RBP16.88■□□□□ 0.29
TPM1-205ENST00000357980 TSPAN12O95859 305 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 SOD1P00441 154 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 CD1DP15813 335 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 CD72P21854 359 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 HSF5Q4G112 596 aaPredicted RBP16.88■□□□□ 0.29
TPM1-205ENST00000357980 PTRHD1Q6GMV3 140 aaKnown RBP16.88■□□□□ 0.29
TPM1-205ENST00000357980 KLC3Q6P597 504 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 ZYG11AQ6WRX3 759 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 FAM47EQ6ZV65 393 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 HDDC3Q8N4P3 179 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 SIDT2Q8NBJ9 832 aaKnown RBP16.88■□□□□ 0.29
TPM1-205ENST00000357980 DDHD1Q8NEL9 900 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 OR6Y1Q8NGX8 325 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 NUS1Q96E22 293 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 DERL2Q9GZP9 239 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 SYTL2Q9HCH5 934 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 TRMT6Q9UJA5 497 aaKnown RBP16.88■□□□□ 0.29
TPM1-205ENST00000357980 DHRS7Q9Y394 339 aa16.88■□□□□ 0.29
TPM1-205ENST00000357980 TSPAN6O43657 245 aa16.87■□□□□ 0.29
TPM1-205ENST00000357980 NEFHP12036 1026 aa16.87■□□□□ 0.29
TPM1-205ENST00000357980 CHRM3P20309 590 aa16.87■□□□□ 0.29
TPM1-205ENST00000357980 DPTQ07507 201 aa16.87■□□□□ 0.29
TPM1-205ENST00000357980 BST1Q10588 318 aa16.87■□□□□ 0.29
TPM1-205ENST00000357980 MLF2Q15773 248 aaPredicted RBP16.87■□□□□ 0.29
TPM1-205ENST00000357980 KHDC1Q4VXA5 237 aaKnown RBP16.87■□□□□ 0.29
TPM1-205ENST00000357980 CGB2Q6NT52 195 aa16.87■□□□□ 0.29
TPM1-205ENST00000357980 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.87■□□□□ 0.29
TPM1-205ENST00000357980 ISCA2Q86U28 154 aa16.87■□□□□ 0.29
TPM1-205ENST00000357980 TMPRSS6Q8IU80 811 aa16.87■□□□□ 0.29
TPM1-205ENST00000357980 PELI3Q8N2H9 469 aa16.87■□□□□ 0.29
TPM1-205ENST00000357980 RPLP0P6Q8NHW5 317 aa16.87■□□□□ 0.29
TPM1-205ENST00000357980 LKAAEAR1Q8TD35 194 aa16.87■□□□□ 0.29
TPM1-205ENST00000357980 CXorf40AQ8TE69 158 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms