RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 MYCLP1P12525 358 aaPredicted RBP25.12■■□□□ 1.61
SSBP3-202ENST00000357475 PMLP29590 882 aa25.12■■□□□ 1.61
SSBP3-202ENST00000357475 RACK1P63244 317 aaKnown RBP25.12■■□□□ 1.61
SSBP3-202ENST00000357475 ZNF449Q6P9G9 518 aa25.12■■□□□ 1.61
SSBP3-202ENST00000357475 CNSTQ6PJW8 725 aa25.12■■□□□ 1.61
SSBP3-202ENST00000357475 MARK2Q7KZI7 788 aaKnown RBP25.12■■□□□ 1.61
SSBP3-202ENST00000357475 DET1Q7L5Y6 550 aa25.12■■□□□ 1.61
SSBP3-202ENST00000357475 SPNS2Q8IVW8 549 aa25.12■■□□□ 1.61
SSBP3-202ENST00000357475 CLDN19Q8N6F1 224 aa25.12■■□□□ 1.61
SSBP3-202ENST00000357475 COPS8Q99627 209 aa25.12■■□□□ 1.61
SSBP3-202ENST00000357475 OR2AG1Q9H205 316 aa25.12■■□□□ 1.61
SSBP3-202ENST00000357475 PHPT1Q9NRX4 125 aaPredicted RBP25.12■■□□□ 1.61
SSBP3-202ENST00000357475 ATXN10Q9UBB4 475 aa25.12■■□□□ 1.61
SSBP3-202ENST00000357475 PILRBQ9UKJ0 227 aa25.12■■□□□ 1.61
SSBP3-202ENST00000357475 CRYL1Q9Y2S2 319 aa25.12■■□□□ 1.61
SSBP3-202ENST00000357475 BCAT2O15382 392 aaPredicted RBP25.11■■□□□ 1.61
SSBP3-202ENST00000357475 FUCA1P04066 466 aa25.11■■□□□ 1.61
SSBP3-202ENST00000357475 THEGLP0DJG4 465 aa25.11■■□□□ 1.61
SSBP3-202ENST00000357475 GCAP28676 217 aa25.11■■□□□ 1.61
SSBP3-202ENST00000357475 CD38P28907 300 aa25.11■■□□□ 1.61
SSBP3-202ENST00000357475 AKT1P31749 480 aa25.11■■□□□ 1.61
SSBP3-202ENST00000357475 TTPAP49638 278 aa25.11■■□□□ 1.61
SSBP3-202ENST00000357475 NFATC4Q14934 902 aa25.11■■□□□ 1.61
SSBP3-202ENST00000357475 STRA8Q7Z7C7 330 aa25.11■■□□□ 1.61
SSBP3-202ENST00000357475 SDCCAG8Q86SQ7 713 aaPredicted RBP25.11■■□□□ 1.61
SSBP3-202ENST00000357475 RASGEF1AQ8N9B8 481 aa25.11■■□□□ 1.61
SSBP3-202ENST00000357475 LPGAT1Q92604 370 aa25.11■■□□□ 1.61
SSBP3-202ENST00000357475 PIGKQ92643 395 aa25.11■■□□□ 1.61
SSBP3-202ENST00000357475 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.11■■□□□ 1.611e-7■■■■■ 35.3
SSBP3-202ENST00000357475 CYTH2Q99418 400 aa25.11■■□□□ 1.61
SSBP3-202ENST00000357475 MRPL40Q9NQ50 206 aaKnown RBP25.11■■□□□ 1.61
SSBP3-202ENST00000357475 GPR27Q9NS67 375 aa25.11■■□□□ 1.61
SSBP3-202ENST00000357475 ZNF8P17098 575 aaPredicted RBP25.1■■□□□ 1.61
SSBP3-202ENST00000357475 CSNK1EP49674 416 aaKnown RBP25.1■■□□□ 1.61
SSBP3-202ENST00000357475 TMEM115Q12893 351 aaPredicted RBP25.1■■□□□ 1.61
SSBP3-202ENST00000357475 AARS2Q5JTZ9 985 aaKnown RBP25.1■■□□□ 1.61
SSBP3-202ENST00000357475 LDLRAP1Q5SW96 308 aa25.1■■□□□ 1.61
SSBP3-202ENST00000357475 CERS6Q6ZMG9 384 aa25.1■■□□□ 1.61
SSBP3-202ENST00000357475 CDKL2Q92772 493 aa25.1■■□□□ 1.61
SSBP3-202ENST00000357475 ATXN7L3BQ96GX2 97 aa25.1■■□□□ 1.61
SSBP3-202ENST00000357475 TRIM39Q9HCM9 518 aa25.1■■□□□ 1.61
SSBP3-202ENST00000357475 FGF22Q9HCT0 170 aa25.1■■□□□ 1.61
SSBP3-202ENST00000357475 VPS18Q9P253 973 aa25.1■■□□□ 1.61
SSBP3-202ENST00000357475 UBA6A0AVT1 1052 aaPredicted RBP25.09■■□□□ 1.61
SSBP3-202ENST00000357475 POC1B-GALNT4F8VUJ3 575 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 CACNB4O00305 520 aaPredicted RBP25.09■■□□□ 1.61
SSBP3-202ENST00000357475 SGTAO43765 313 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 NDUFS3O75489 264 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 ASMTLO95671 621 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 CEACAM5P06731 702 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 RABIFP47224 123 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 LEPRP48357 1165 aaKnown RBP25.09■■□□□ 1.61
SSBP3-202ENST00000357475 CTSCP53634 463 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 KIAA1024LP59773 190 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 ZNF549Q6P9A3 640 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 LMNTD2Q8IXW0 634 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 MFSD2AQ8NA29 543 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 ACVR1CQ8NER5 493 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 SGF29Q96ES7 293 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 KLHDC7BQ96G42 594 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 MCMBPQ9BTE3 642 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 P2RY12Q9H244 342 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 PRKAB1Q9Y478 270 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 TMEM131Q92545 1883 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 PI4KAP42356 2102 aa25.09■■□□□ 1.61
SSBP3-202ENST00000357475 EXOC1LA0A1B0GW35 172 aa25.08■■□□□ 1.61
SSBP3-202ENST00000357475 SCAMP1O15126 338 aa25.08■■□□□ 1.61
SSBP3-202ENST00000357475 HOXC4P09017 264 aaPredicted RBP25.08■■□□□ 1.61
SSBP3-202ENST00000357475 MSH3P20585 1137 aa25.08■■□□□ 1.61
SSBP3-202ENST00000357475 EIF3BP55884 814 aaKnown RBP25.08■■□□□ 1.61
SSBP3-202ENST00000357475 YPEL5P62699 121 aa25.08■■□□□ 1.61
SSBP3-202ENST00000357475 ITIH4Q14624 930 aa25.08■■□□□ 1.61
SSBP3-202ENST00000357475 LYPLAL1Q5VWZ2 237 aa25.08■■□□□ 1.61
SSBP3-202ENST00000357475 ENPP7Q6UWV6 458 aa25.08■■□□□ 1.61
SSBP3-202ENST00000357475 PACS1Q6VY07 963 aa25.08■■□□□ 1.61
SSBP3-202ENST00000357475 SPATS2Q86XZ4 545 aaKnown RBP25.08■■□□□ 1.61
SSBP3-202ENST00000357475 TCF12Q99081 682 aa25.08■■□□□ 1.61
SSBP3-202ENST00000357475 PAFAH2Q99487 392 aa25.08■■□□□ 1.61
SSBP3-202ENST00000357475 INTS10Q9NVR2 710 aaKnown RBP25.08■■□□□ 1.61
SSBP3-202ENST00000357475 KNL1Q8NG31 2342 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 ADAMTS9Q9P2N4 1935 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 OR2AG2A6NM03 316 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 FMO4P31512 558 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 KLHL38Q2WGJ6 581 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 CTSL3PQ5NE16 218 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 RBM20Q5T481 1227 aaKnown RBP25.07■■□□□ 1.6
SSBP3-202ENST00000357475 KIAA0408Q6ZU52 694 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 SLC26A11Q86WA9 606 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 LRRC6Q86X45 466 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 RBFAQ8N0V3 343 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 BEND7Q8N7W2 519 aaPredicted RBP25.07■■□□□ 1.6
SSBP3-202ENST00000357475 OR1E3Q8WZA6 343 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 PDXPQ96GD0 296 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 BIRC8Q96P09 236 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 NDNQ99608 321 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 FSCN3Q9NQT6 498 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 FAM86C1Q9NVL1 165 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 PLAAQ9Y263 795 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 IQCF5A8MTL0 148 aa25.07■■□□□ 1.6
SSBP3-202ENST00000357475 TLR4O00206 839 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms