RNA–Protein interactions for RNA: ENST00000357365.7

SDCCAG3-202, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SDCCAG3, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-202ENST00000357365 FAR2Q96K12 515 aa28.3■■■□□ 2.12
SDCCAG3-202ENST00000357365 LRRC3BQ96PB8 259 aa28.3■■■□□ 2.12
SDCCAG3-202ENST00000357365 ABCG8Q9H221 673 aa28.3■■■□□ 2.12
SDCCAG3-202ENST00000357365 SUV39H2Q9H5I1 410 aa28.3■■■□□ 2.12
SDCCAG3-202ENST00000357365 DNAJC15Q9Y5T4 150 aa28.3■■■□□ 2.12
SDCCAG3-202ENST00000357365 PSMG1O95456 288 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 CHRM1P11229 460 aaPredicted RBP28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 EZRP15311 586 aaKnown RBP28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 LHCGRP22888 699 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 WEE1P30291 646 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 NUDT2P50583 147 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 SESN3P58005 492 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 C1orf146Q5VVC0 180 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 LRRC66Q68CR7 880 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 NET1Q7Z628 596 aaPredicted RBP28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 ADGRG2Q8IZP9 1017 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 CIPCQ9C0C6 399 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 FBRSL1Q9HCM7 1045 aaKnown RBP28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 SLC25A13Q9UJS0 675 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 GLYATL1P3A0A0U1RQE8 302 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 THRAP10827 490 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 ECT2LQ008S8 904 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 SNX20Q7Z614 316 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 STK40Q8N2I9 435 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 ACTRT2Q8TDY3 377 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 CYB5D2Q8WUJ1 264 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 CCDC124Q96CT7 223 aaKnown RBP28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 RCN3Q96D15 328 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 ECHDC3Q96DC8 303 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 GIMAP2Q9UG22 337 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 CDH22Q9UJ99 828 aa28.29■■■□□ 2.12
SDCCAG3-202ENST00000357365 INHBCP55103 352 aa28.28■■■□□ 2.12
SDCCAG3-202ENST00000357365 SATB1Q01826 763 aa28.28■■■□□ 2.12
SDCCAG3-202ENST00000357365 CYLC2Q14093 348 aaPredicted RBP28.28■■■□□ 2.12
SDCCAG3-202ENST00000357365 CARD16Q5EG05 197 aa28.28■■■□□ 2.12
SDCCAG3-202ENST00000357365 AFAP1L2Q8N4X5 818 aa28.28■■■□□ 2.12
SDCCAG3-202ENST00000357365 ITFG1Q8TB96 612 aa28.28■■■□□ 2.12
SDCCAG3-202ENST00000357365 PHOSPHO2Q8TCD6 241 aa28.28■■■□□ 2.12
SDCCAG3-202ENST00000357365 UNC80Q8N2C7 3258 aa28.28■■■□□ 2.12
SDCCAG3-202ENST00000357365 CIB2O75838 187 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 CD9P21926 228 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 PRDX3P30048 256 aaKnown RBP28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 CLCQ05315 142 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 TBL3Q12788 808 aaKnown RBP28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 PTRHD1Q6GMV3 140 aaKnown RBP28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 CHSY3Q70JA7 882 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 ST13P5Q8NFI4 369 aaPredicted RBP28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 CFAP61Q8NHU2 1237 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 TBRG4Q969Z0 631 aaKnown RBP eCLIP28.27■■■□□ 2.121e-7■■■■■ 35.3
SDCCAG3-202ENST00000357365 ISG20Q96AZ6 181 aaKnown RBP28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 ZNF707Q96C28 371 aaPredicted RBP28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 CLPBQ9H078 707 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 FGF19O95750 216 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 GEN1Q17RS7 908 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 UGT3A1Q6NUS8 523 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 PGM2L1Q6PCE3 622 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 CERS6Q6ZMG9 384 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 GK5Q6ZS86 529 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 HPS6Q86YV9 775 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 C12orf76Q8N812 135 aaPredicted RBP28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 RP9Q8TA86 221 aaKnown RBP28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 SCRN2Q96FV2 425 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 MTG2Q9H4K7 406 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 DHRS7Q9Y394 339 aa28.27■■■□□ 2.12
SDCCAG3-202ENST00000357365 TBX10O75333 385 aa28.26■■■□□ 2.12
SDCCAG3-202ENST00000357365 ITGALP20701 1170 aa28.26■■■□□ 2.12
SDCCAG3-202ENST00000357365 ACTR3P61158 418 aa28.26■■■□□ 2.12
SDCCAG3-202ENST00000357365 PTSQ03393 145 aa28.26■■■□□ 2.12
SDCCAG3-202ENST00000357365 CLYBLQ8N0X4 340 aa28.26■■■□□ 2.12
SDCCAG3-202ENST00000357365 C19orf60Q96EN9 201 aa28.26■■■□□ 2.12
SDCCAG3-202ENST00000357365 PLEKHG4BQ96PX9 1271 aa28.26■■■□□ 2.12
SDCCAG3-202ENST00000357365 C15orf41Q9Y2V0 281 aa28.26■■■□□ 2.12
SDCCAG3-202ENST00000357365 WASF2Q9Y6W5 498 aa28.26■■■□□ 2.12
SDCCAG3-202ENST00000357365 PLXNB3Q9ULL4 1909 aa28.26■■■□□ 2.11
SDCCAG3-202ENST00000357365 ZNF7P17097 686 aaPredicted RBP28.26■■■□□ 2.11
SDCCAG3-202ENST00000357365 ACRV1P26436 265 aa28.26■■■□□ 2.11
SDCCAG3-202ENST00000357365 SPAM1P38567 509 aa28.26■■■□□ 2.11
SDCCAG3-202ENST00000357365 TUBB1Q9H4B7 451 aa28.26■■■□□ 2.11
SDCCAG3-202ENST00000357365 CRLS1Q9UJA2 301 aa28.26■■■□□ 2.11
SDCCAG3-202ENST00000357365 CEP290O15078 2479 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 TRBV5-4A0A0C4DH59 114 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 XYLBO75191 536 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 RPS17P08708 135 aaKnown RBP28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 PTDSS1P48651 473 aaKnown RBP28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 C18orf21Q32NC0 220 aaPredicted RBP28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 TRMT5Q32P41 509 aaKnown RBP28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 TCHHL1Q5QJ38 904 aaPredicted RBP28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 ADGRD2Q7Z7M1 963 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 GPSM1Q86YR5 675 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 OR2A12Q8NGT7 310 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 STMN2Q93045 179 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 LYSMD1Q96S90 227 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 APPL1Q9UKG1 709 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 COMMD10Q9Y6G5 202 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 SYCE1LA8MT33 242 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 AZIN1O14977 448 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 UBDO15205 165 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 TRIM16O95361 564 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 HOXA9P31269 272 aa28.25■■■□□ 2.11
SDCCAG3-202ENST00000357365 UBE3AQ05086 875 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms