RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 OGNP20774 298 aaKnown RBP14.75□□□□□ -0.05
CHD4-201ENST00000357008 PEX6Q13608 980 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 SNAPC1Q16533 368 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 NOMO2Q5JPE7 1267 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 ZDHHC20Q5W0Z9 365 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 CERS6Q6ZMG9 384 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 PIK3R3Q92569 461 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 RAD51AP1Q96B01 352 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 MYO19Q96H55 970 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 C1QTNF3-AMACRE9PGA6 284 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 NDST3O95803 873 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 MT-ND1P03886 318 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 RPS6KA3P51812 740 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 MPP1Q00013 466 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 KCNA10Q16322 511 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 FAM98AQ8NCA5 519 aaKnown RBP14.75□□□□□ -0.05
CHD4-201ENST00000357008 BTN2A3PQ96KV6 586 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 KAT8Q9H7Z6 458 aaKnown RBP14.75□□□□□ -0.05
CHD4-201ENST00000357008 IPPKQ9H8X2 491 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 MKL2Q9ULH7 1088 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 ASF1AQ9Y294 204 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 WTIPA6NIX2 430 aaPredicted RBP14.75□□□□□ -0.05
CHD4-201ENST00000357008 ADAMDEC1O15204 470 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 ZW10O43264 779 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 NDUFS2O75306 463 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 TCEA3O75764 348 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 SLC25A14O95258 325 aaPredicted RBP14.75□□□□□ -0.05
CHD4-201ENST00000357008 CREB1P16220 341 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 GCNT6Q5T4J0 391 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 FAM171BQ6P995 826 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 CSGALNACT1Q8TDX6 532 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 CXorf40BQ96DE9 158 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 SLC35C2Q9NQQ7 365 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 NR2E1Q9Y466 385 aa14.75□□□□□ -0.05
CHD4-201ENST00000357008 OAS3Q9Y6K5 1087 aaKnown RBP14.75□□□□□ -0.05
CHD4-201ENST00000357008 MANSC4A6NHS7 340 aaPredicted RBP14.74□□□□□ -0.05
CHD4-201ENST00000357008 PQBP1O60828 265 aaKnown RBP14.74□□□□□ -0.05
CHD4-201ENST00000357008 SLC25A12O75746 678 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 CLDN9O95484 217 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 RLN1P04808 185 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 MNDAP41218 407 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 PTGES3Q15185 160 aaKnown RBP14.74□□□□□ -0.05
CHD4-201ENST00000357008 TRPV3Q8NET8 790 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 AHCYL2Q96HN2 611 aaKnown RBP14.74□□□□□ -0.05
CHD4-201ENST00000357008 SPACA7Q96KW9 195 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 FAM124BQ9H5Z6 455 aaPredicted RBP14.74□□□□□ -0.05
CHD4-201ENST00000357008 TP73O15350 636 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 LGR5O75473 907 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 SLC35G4P0C7Q5 338 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 FOXN2P32314 431 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 MBTD1Q05BQ5 628 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 ABHD15Q6UXT9 468 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 ZNF248Q8NDW4 579 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 GPR21Q99679 349 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 GJB1P08034 283 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 CCR3P51677 355 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 SMAD3P84022 425 aaKnown RBP14.74□□□□□ -0.05
CHD4-201ENST00000357008 CA9Q16790 459 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 C11orf65Q8NCR3 313 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 VANGL1Q8TAA9 524 aaPredicted RBP14.74□□□□□ -0.05
CHD4-201ENST00000357008 MED28Q9H204 178 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 ZFYVE1Q9HBF4 777 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 NOCTQ9UK39 431 aaKnown RBP14.74□□□□□ -0.05
CHD4-201ENST00000357008 CNTN6Q9UQ52 1028 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 CLDN11O75508 207 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 METTL18O95568 372 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 CST3P01034 146 aaPredicted RBP14.74□□□□□ -0.05
CHD4-201ENST00000357008 IFNW1P05000 195 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 SUZ12Q15022 739 aaKnown RBP14.74□□□□□ -0.05
CHD4-201ENST00000357008 PAOXQ6QHF9 649 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 TRPV5Q9NQA5 729 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 MYPNQ86TC9 1320 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 NR4A1P22736 598 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 CLK3P49761 638 aaKnown RBP14.74□□□□□ -0.05
CHD4-201ENST00000357008 ZNF697Q5TEC3 545 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 FBXO42Q6P3S6 717 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 RASSF6Q6ZTQ3 369 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 TAF8Q7Z7C8 310 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 UNC5BQ8IZJ1 945 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 ZNF567Q8N184 647 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 RERGQ96A58 199 aaPredicted RBP14.74□□□□□ -0.05
CHD4-201ENST00000357008 TCF25Q9BQ70 676 aa14.74□□□□□ -0.05
CHD4-201ENST00000357008 FAM25EA8MYX2 175 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 ITPKAP23677 461 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 CARTPTQ16568 116 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 PGBD2Q6P3X8 592 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 GLIS2Q9BZE0 524 aaPredicted RBP14.73□□□□□ -0.05
CHD4-201ENST00000357008 SCAMP3O14828 347 aaKnown RBP14.73□□□□□ -0.05
CHD4-201ENST00000357008 SEMA3DO95025 777 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 ASLP04424 464 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 CD48P09326 243 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 CTSEP14091 401 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 ADAM17P78536 824 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 BEND5Q7L4P6 421 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 HAVCR1Q96D42 359 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 ARHGEF4Q9NR80 690 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 SLC27A5Q9Y2P5 690 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 VGLL4Q14135 290 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 SMCO1Q147U7 214 aa14.73□□□□□ -0.05
CHD4-201ENST00000357008 SDHAF4Q5VUM1 108 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms