RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 MARCH4Q9P2E8 410 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-202ENST00000355841 APOBEC3BQ9UH17 382 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-202ENST00000355841 TP53BP1Q12888 1972 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-202ENST00000355841 ZNF106Q9H2Y7 1883 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 MAGEB16A2A368 324 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 NDC80O14777 642 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 RASGRP1O95267 797 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 CELA2BP08218 269 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 ZNF8P17098 575 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 AKT1P31749 480 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 FOXN2P32314 431 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 SEMA3AQ14563 771 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 PRRT3Q5FWE3 981 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 DET1Q7L5Y6 550 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 TMEM135Q86UB9 458 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 SERPINA9Q86WD7 417 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 CCDC25Q86WR0 208 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 NXPE1Q8N323 547 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 CFAP36Q96G28 342 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 SLC13A1Q9BZW2 595 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 TMEM168Q9H0V1 697 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 TM7SF3Q9NS93 570 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 ZDHHC18Q9NUE0 388 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 SMOXQ9NWM0 555 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 TEX264Q9Y6I9 313 aa17.69■□□□□ 0.42
PDLIM7-202ENST00000355841 ZCWPW2A0A1B0GU75 182 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 AGAP14A8MT82 685 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 TNFRSF10CO14798 259 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 DNAJC6O75061 913 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 F7P08709 466 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 PGAM1P18669 254 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 RXRGP48443 463 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 ARCN1P48444 511 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 CCT8P50990 548 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 TMEM115Q12893 351 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 STPG1Q5TH74 334 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 CRTC3Q6UUV7 619 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 ZBED8Q8IZ13 594 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 GPR161Q8N6U8 529 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 DDHD1Q8NEL9 900 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 CCL4L1Q8NHW4 92 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 LRRC61Q9BV99 259 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 BOCQ9BWV1 1114 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 PLAC1Q9HBJ0 212 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 SAYSD1Q9NPB0 183 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 DNAAF2Q9NVR5 837 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 ZNHIT2Q9UHR6 403 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 PLEKHM1Q9Y4G2 1056 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 GPSM3Q9Y4H4 160 aa17.68■□□□□ 0.42
PDLIM7-202ENST00000355841 TRBV5-4A0A0C4DH59 114 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 PIAS2O75928 621 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 USP1O94782 785 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 CDK14O94921 469 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 TNFP01375 233 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 DGKAP23743 735 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 ACRV1P26436 265 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 EPHA8P29322 1005 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 CARSP49589 748 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 B4GALNT1Q00973 533 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 CAV1Q03135 178 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 CRYMQ14894 314 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 DBN1Q16643 649 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 GPR33Q49SQ1 333 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 LDLRAP1Q5SW96 308 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 CENPUQ71F23 418 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 OXR1Q8N573 874 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 OTUD6BQ8N6M0 293 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 RASGEF1AQ8N9B8 481 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 FBXO36Q8NEA4 188 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 LMX1AQ8TE12 382 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 FAM114A2Q9NRY5 505 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 CATSPERZQ9NTU4 200 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 VPS18Q9P253 973 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 ZC3H7BQ9UGR2 993 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 DGKBQ9Y6T7 804 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 TDRD6O60522 2096 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 CABIN1Q9Y6J0 2220 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 OR2AG2A6NM03 316 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 E7ESA3 106 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 CD3EAPO15446 510 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 POLBP06746 335 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 MSH3P20585 1137 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 CTSCP53634 463 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 HNRNPKP61978 463 aaKnown RBP eCLIP17.67■□□□□ 0.426e-7■■■■■ 31.4
PDLIM7-202ENST00000355841 HLTFQ14527 1009 aaKnown RBP eCLIP17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 PLA2G4EQ3MJ16 856 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 PYCR3Q53H96 274 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 FASTKD1Q53R41 847 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 KIAA0930Q6ICG6 404 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 CAPN12Q6ZSI9 719 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 SLC25A45Q8N413 288 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 ZNF548Q8NEK5 533 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 SAP25Q8TEE9 199 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 ULK4Q96C45 1275 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 SGF29Q96ES7 293 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 TTC25Q96NG3 672 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 COPS8Q99627 209 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 CLPBQ9H078 707 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 ST14Q9Y5Y6 855 aa17.67■□□□□ 0.42
PDLIM7-202ENST00000355841 PLXNB3Q9ULL4 1909 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms